&, 2.12.3 | Ceil, 2.28.23 |
2D labels, 2.27.53.1 | Cell, 2.28.24 |
to 3D, 3.13.2.3 | Charge, 2.28.25 |
smooth, 2.28.135.2 | Chemical, 2.28.26 |
3D chemical builder, 1.4.2.8 | Cluster, 2.28.27 |
font size, 2.27.23.12 | Collada, 5.5.3 |
label, 2.27.23.12, 2.27.82.32 | Collection, 2.28.27.1 |
labels, 2.27.53.1 | Color, 2.28.28 |
mol file, 2.29.84 | from gradient, 2.28.28.1 |
plots intro, 1.4.3.7 | image, 2.28.28.2 |
smoothing, 2.28.135.3 | Connolly surface, 5.8.7 |
superposition, 2.29.22 | Consensus, 2.28.29 |
transformations, 2.27.95.2 | Corr, 2.28.30 |
3dxml, 5.5.3 | Cos, 2.28.31 |
=, 2.12.1 | Cosh, 2.28.32 |
A, 5.1 | Count, 2.28.33 |
Abs, 2.28.1 | CubicRoot, 2.28.34 |
Acc, 2.28.2 | D, 5.4 |
Acos, 2.28.3 | DAE, 5.5.3 |
Acosh, 2.28.4 | DE, 2.27.34.2 |
Adobe, 2.19.23 | DNA Representation, 1.4.1.3 |
Align, 2.28.5 | alignment, 2.27.3.3 |
sequence, 2.28.5.1 | melting temperature, 2.28.153 |
Angle, 2.28.6 | views, 1.4.1.3 |
Area, 2.28.7 | Date, 2.28.35 |
residue contacts, 2.28.7.1 | Deletion, 2.28.36 |
Asin, 2.28.8 | Disgeo, 2.28.37 |
Asinh, 2.28.9 | Distance, 2.28.38 |
Ask, 2.28.10 | 2 alignments, 2.28.38.11 |
Askg, 2.28.11 | matrices, 2.28.38.7 |
Atan, 2.28.12 | Dayhoff, 2.28.38.9 |
Atan2, 2.28.13 | Tanimoto, 2.28.38.6 |
Atanh, 2.28.14 | alignment, 2.28.38.10 |
Atom, 2.28.15 | as_, 2.28.38.3 |
Augment, 2.28.16 | rarray, 2.28.38.4 |
Axis, 2.28.17 | atoms, 2.28.38.3 |
B, 5.2 | chemical, 2.28.38.6, 2.28.38.13 |
BPMC, 5.2.5 | dayhoff, 2.28.38.9 |
Bfactor, 2.28.18 | iarray, 2.28.38.1 |
Boltzmann, 2.28.19 | alignment, 2.28.38.10 |
Box, 2.28.20 | matrix, 2.28.38.5, 2.28.38.7 |
Bracket, 2.28.21 | multiple atomic, 2.28.38.4 |
C, 5.3 | rarray, 2.28.38.2 |
CCP4, 5.6.6 | tether, 2.28.38.8 |
CONSENSUS, 2.21.1 | tree, 2.28.38.12 |
CONSENSUSCOLOR, 2.21.2 | cluster, 2.28.38.12 |
CONSENSUS_strength, 2.17.9 | H, 5.5 |
Cad, 2.28.22, 2.28.22.1, 2.28.22.2 | EDS server, 2.29.42 |
Cad1, 2.28.22.1 | EST-alignment, 2.27.3.3 |
Cadalign, 2.28.22.2 | Eigen, 2.28.39 |
Error, 2.28.41 | hbondWidth, 2.21.5.24 |
soap, 2.28.42 | hetatmZoom, 2.21.5.26 |
Exist, 2.28.43 | hydrogenDisplay, 2.21.5.27 |
molcart, 2.28.43.1 | light, 2.21.5.28 |
Existenv, 2.28.44 | lightPosition, 2.21.5.29 |
Exp, 2.28.46 | mapLineWidth, 2.21.5.30 |
Extension, 2.28.45 | occupancyDisplay, 2.21.5.31 |
FILTER, 2.21.3 | occupancyRadiusRatio, 2.21.5.32 |
Z, 2.21.3.1 | quality, 2.21.5.33, 2.28.81.1 |
gz, 2.21.3.2 | rainbowBarStyle, 2.21.5.34 |
uue, 2.21.3.3 | resLabelDrag, 2.21.5.35 |
FTP, 2.21.4 | resLabelShift, 2.21.5.36 |
createFile, 2.21.4.1 | ribbonCylinderRadius, 2.21.5.37 |
keepFile, 2.21.4.2 | ribbonRatio, 2.21.5.38 |
proxy, 2.21.4.3 | ribbonWidth, 2.21.5.39 |
Field, 2.28.47, 2.28.47.1 | ribbonWorm, 2.21.5.40 |
user, 2.28.47.1 | rocking, 2.21.5.41 |
File, 2.28.48 | rockingRange, 2.21.5.42 |
Find, 2.28.49 | rockingSpeed, 2.21.5.43 |
chemical, 2.28.49.3 | selectionLevel, 2.21.5.44 |
pattern, 2.28.49.3 | selectionStyle, 2.21.5.45 |
in array, 2.28.49.1 | sketchAccents, 2.21.5.25 |
table, 2.28.49.2 | stereoMode, 2.21.5.46 |
FlexLM license info, 2.28.176 | stickRadius, 2.21.5.26, 2.21.5.47 |
Floor, 2.28.50 | surfaceDotDensity, 2.21.5.49 |
Formula, 2.28.51 | surfaceDotSize, 2.21.5.48 |
GRAPHICS, 2.21.5 | surfaceProbeRadius, 2.21.5.50 |
atomLabelShift, 2.21.5.1 | transparency, 2.21.5.51 |
atomValueCircles, 2.21.5.2 | wormRadius, 2.21.5.52 |
ballRadius, 2.21.5.3, 2.21.5.26 | GRID, 2.21.6 |
ballStickRatio, 2.21.5.4 | gcghExteriorPenalty, 2.21.6.1 |
chainBreakLabelDisplay, 2.21.5.7 | gpGaussianRadius, 2.21.6.6 |
chainBreakStyle, 2.21.5.6 | margin, 2.21.6.2 |
clashWidth, 2.21.5.5 | maxEl, 2.21.6.3 |
cpkClipCaps, 2.21.5.8 | maxVw, 2.21.6.5 |
displayLineLabels, 2.21.5.9 | minEl, 2.21.6.4 |
displayMapBox, 2.21.5.10 | GROB, 2.21.7 |
dnaBallRadius, 2.21.5.11 | arrowRadius, 2.21.7.3 |
dnaRibbonRatio, 2.21.5.12 | atomSphereRadius, 2.21.7.1 |
dnaRibbonWidth, 2.21.5.13 | contourSigmaIncrement, 2.21.7.5 |
dnaRibbonWorm, 2.21.5.14 | relArrowHead, 2.21.7.4 |
dnaStickRadius, 2.21.5.15 | relArrowSize, 2.21.7.2 |
formalChargeDisplay, 2.21.5.16 | GUI, 2.21.8 |
grobLineWidth, 2.21.5.17 | dialog customize programming, 2.26 |
hbondAngleSharpness, 2.21.5.21 | plot, 2.27.59.31 |
hbondBallPeriod, 2.21.5.22 | tableRowMarkColors, 2.21.8.4 |
hbondBallStyle, 2.21.5.23 | windowLayout, 2.21.8.5 |
hbondMinStrength, 2.21.5.20 | workspaceFolderStyle, 2.21.8.8 |
hbondRebuild, 2.21.5.19 | workspaceStyle, 2.21.8.6 |
hbondStyle, 2.21.5.18 | workspaceTabStyle, 2.21.8.7 |
Getenv, 2.28.53 | IcmSequence, 2.28.60 |
Gradient, 2.28.54 | Image, 2.28.61 |
Graphics, 1.4.1 | collection, 3.9.2.1 |
Grob, 2.28.55 | frame by frame, 3.9.2.2 |
Group, 2.28.56 | Index, 2.28.62 |
HTTP.proxy, 2.21.4.4 | chemical, 2.28.62.1 |
Hartree-Fock, 2.27.77.20, 2.27.103.17 | element in array, 2.28.62.7 |
Header, 2.28.57 | regexp, 2.28.62.3 |
Histogram, 2.28.58 | string, 2.28.62.2 |
N, 5.6 | table label, 2.28.62.5 |
ICM desktop, 2.21.8.5 | selection, 2.28.62.4 |
documents, 2.27.77.3 | tree, 2.28.62.8 |
modules, 1.4.4 | unique elements, 2.28.62.6 |
object, 2.29.13 | Indexx, 2.28.63 |
residue library, 2.19.24 | Info, 2.28.65 |
ICM-shell, 3.1, 5.8.5 | image, 2.28.66 |
intro, 1.7.1 | Insertion, 2.28.64 |
script, 2.27.8 | Integer, 2.28.67 |
ICMFF force field, 2.29.78 | Integral, 2.28.68 |
ICMHOME, 3.1.2.1 | Interrupt, 2.28.69 |
shell variable, 3.1.2.1 | Introduction, 1 |
IMAGE, 2.21.9 | JSON, 2.27.77.53 |
bondLength2D, 2.21.9.15 | LIBRARY, 2.21.10 |
color, 2.21.9.8 | men, 2.21.10.1 |
compress, 2.21.9.9 | res, 2.21.10.2 |
gammaCorrection, 2.21.9.7 | Label, 2.28.70 |
generateAlpha, 2.21.9.10 | Laplacian, 2.28.71 |
lineWidth, 2.21.9.3 | Latent, 2.28.175.3 |
lineWidth2D, 2.21.9.14 | LatentVector, 2.28.175.3 |
orientation, 2.21.9.16 | Length, 2.28.72 |
paperSize, 2.21.9.17 | LinearFit, 2.28.73 |
previewResolution, 2.21.9.13 | LinearModel, 2.28.74 |
previewer, 2.21.9.12 | Log, 2.28.75 |
printerDPI, 2.21.9.2 | LogP, 2.28.103 |
quality, 2.21.9.1 | LogS, 2.28.103 |
rgb2bw, 2.21.9.18 | M_out, 2.22.5 |
scale, 2.21.9.4 | Map, 2.28.76 |
stereoAngle, 2.21.9.6 | Markush structures, 2.27.50 |
stereoBase, 2.21.9.5 | Mass, 2.28.77 |
stereoText, 2.21.9.11 | Match, 2.28.79 |
writeScale, 2.21.9.19 | Mathews, 2.28.125.2 |
I_out, 2.22.4 | Matrix, 2.28.80 |
Iarray, 2.28.59, 2.28.59.4, 2.28.59.5 | alignment, 2.28.80.8 |
atom numbers, 2.28.59.4 | boundary, 2.28.80.9 |
bits to integers, 2.28.59.3 | grob connectivity, 2.28.80.12 |
inverse, 2.28.59.2 | histogram, 2.28.80.11 |
residue numbers, 2.28.59.5 | new, 2.28.80.1 |
reverse, 2.28.59.2 | residue areas, 2.28.80.7 |
stack, 2.28.59.6 | comparison, 2.28.80.4 |
Icm Options, 2.1 | stack, 2.28.80.10 |
Remainder, 2.28.113 | Select_by atom numbers, 2.28.126.10 |
Replace, 2.28.115 | Select_by_sequence, 2.28.126.13 |
chemical, 2.28.115.4 | Select_by_text, 2.28.126.9 |
exact, 2.28.115.1 | Select_lists, 2.28.126.12 |
regexp, 2.28.115.3 | Select_patching, 2.28.126.11 |
simple, 2.28.115.2 | Select_projection, 2.28.126.8 |
Res, 2.28.116, 2.28.117 | Sequence, 2.28.127 |
Resali, 2.28.117 | array, 2.28.127.2 |
Resolution, 2.28.118 | Sequence(dna reverse), 2.28.127.1 |
Rfactor, 2.28.120 | Shuffle, 2.28.128 |
Rfree, 2.28.121 | Sign, 2.28.129 |
Ring, 2.28.119 | Simulations, 1.4.2 |
Rmsd, 2.28.122 | Sin, 2.28.130 |
of subset, 2.21.14 | Sinh, 2.28.131 |
Rot, 2.28.123 | Site, 2.28.132 |
S, 5.8 | Slide, 2.28.133 |
SAR analysis, 2.27.59.27, 2.27.85.2 | Smiles, 2.28.134 |
SC, 2.27.34.2 | Smooth, 2.16.23, 2.28.135, 2.28.135.1, 2.28.135.3 |
SEQUENCE.restoreOrigNames, 2.21.12.14 | matrix, 2.28.135.2 |
SITE, 2.21.13 | Smoothrs, 2.28.135.3 |
defSelect, 2.21.13.2 | SoapMessage, 2.28.141 |
labelOffset, 2.21.13.3 | SolveQuadratic, 2.28.136 |
labelStyle, 2.21.13.4 | SolveQubic, 2.28.137 |
labelWrap, 2.21.13.5 | Sort, 2.28.142 |
showSeqSkip, 2.21.13.6 | Sphere, 2.21.14.3, 2.28.140 |
wrapComment, 2.21.13.7 | Split, 2.28.143 |
SLN notation, 2.28.145.9 | chemical, 2.28.143.4 |
SMARTS, 2.24, 2.27.10, 2.28.91.2 | multisep, 2.28.143.3 |
SOAP, 2.28.88.2, 2.28.91.7, 2.28.170.1 | regexp, 2.28.143.2 |
request message, 2.28.141 | tree, 2.28.143.1 |
SSSR, 2.28.119 | Sql, 2.28.138 |
S_out, 2.22.8 | Sqrt, 2.28.139 |
Sarray, 2.28.124 | Srmsd, 2.28.144 |
index, 2.28.124.1 | Sstructure, 2.28.146 |
Score, 2.28.125 | String, 2.28.145, 2.28.145.7 |
alignment, 2.28.125.6 | alternative, 2.28.145.6 |
conservation, 2.28.125.5 | mol, 2.28.145.2 |
model, 2.28.125.2 | selection, 2.28.145.7 |
overlap, 2.28.125.1 | slide gui, 2.28.145.8 |
predictions, 2.28.125.3 | substring, 2.28.145.1 |
sequence, 2.28.125.4 | chemical formula, 2.28.145.9 |
Select, 2.28.126 | Sum, 2.28.147 |
break, 2.28.126.1 | chemical, 2.28.147.1 |
atom property, 2.28.126.7 | image, 2.28.147.2 |
nmembers, 2.28.126.4 | Swissprot, 2.27.103.23 |
string, 2.28.126.9 | Symgroup, 2.28.148 |
expand, 2.28.126.6 | T, 5.9 |
fix, 2.28.126.2 | TOOLS, 2.21.14 |
graphical, 2.28.126.5 | edsDir, 2.21.14.1 |
neighbors, 2.28.126.3 | membrane, 2.21.14.2 |
pdbReadNmrModels, 2.21.14.4 | soap, 2.28.174 |
superimposeMaxDeviation, 2.21.14.7 | Vector, 2.28.16, 2.28.175, 2.28.175.1, 2.28.175.3 |
superimposeMaxIterations, 2.21.14.5 | symmetry transformation, 2.28.175.2 |
superimposeMinAtomFraction, 2.21.14.6 | Vectorproduct, 2.28.175.1 |
tsShape, 2.21.14.9 | Vectorsymmetrytransformation, 2.28.175.2 |
tsWeight, 2.21.14.10 | Version, 2.28.176 |
writePdbRenameRes, 2.21.14.11 | View, 2.28.178 |
Table, 2.28.149 | Volume, 2.28.177 |
alignment numbers, 2.28.149.3 | WEBAUTOLINK, 2.21.16 |
distance, 2.28.149.9 | WEBLINK, 2.21.15 |
matrix, 2.28.149.4 | Warning, 2.28.179 |
model, 2.28.149.7 | Wavefront format, 2.27.77.21 |
pairs, 2.28.149.5 | XML, 2.10 |
stack, 2.28.149.6 | Xyz, 2.28.180 |
url_decoder, 2.28.149.1 | axes, 2.28.180.7 |
Table(alignment), 2.28.149.2 | chemical match, 2.28.180.5 |
Table(stack), 2.28.149.6 | fract, 2.28.180.3 |
Tan, 2.28.150 | mesh, 2.28.180.2 |
Tanh, 2.28.151 | points, 2.28.180.1 |
Tanimoto, 2.28.59.3 | transformed xyz, 2.28.180.4 |
distance, 2.27.59.35 | vector2matrix, 2.28.180.6 |
matrix, 2.28.38.6 | ZEGA, 5.10.9 |
Temperature, 2.28.153 | intro, 1.4.3.6 |
Tensor, 2.28.152 | _NAME, 2.27.82.40 |
Time, 2.28.154 | _chemBatch, 3.1.2.5 |
Tointeger, 2.28.155 | _confGen, 3.13.2.3 |
Tolower, 2.28.156 | _dockScan, 3.13.2.6 |
Toreal, 2.28.157 | _macro, 2.30.1 |
Torsion, 2.28.158 | file, 2.30.1 |
Tostring, 2.28.159 | _startup, 3.1.2.3 |
Toupper, 2.28.160 | file, 2.30.2 |
Tr123, 2.28.161 | icm, 2.30.2 |
Tr321, 2.28.162 | a_, 2.8.1 |
Trace, 2.28.163 | abbr, 1.6 |
Trans, 2.28.164 | abbreviations, 1.6 |
Transform, 2.28.165 | absolute to cell x y z, 2.28.180.3 |
Transpose, 2.28.166 | accFunction, 2.22.2 |
Trim, 2.28.167 | acceptor, 3.6.1 |
sequence, 2.28.168 | access large sdf file, 2.27.77.23 |
Turn, 2.28.169 | accessMethod, 2.20.1 |
Type, 2.28.170 | accessible residues, 3.3.6 |
molcart, 2.28.170.2 | surface, 2.27.59.14, 5.8.15 |
soap, 2.28.170.1 | accessing sections, 2.27.103.23 |
Z, 5.10 | accuracy, 2.28.125.2 |
Unique, 2.28.171 | activate fog, 2.27.23.24 |
Unix, 2.28.172 | alignment, 2.27.82.33 |
Uppsala, 2.29.42 | document, 2.27.82.33 |
server, 2.29.43 | tab, 2.27.82.33 |
V_, 2.8.1 | table, 5.9.2.4 |
Value, 2.28.173 | add, 2.27.1 |
function, 2.27.1.1.1 | sequence reordering, 2.28.5 |
matrix, 2.27.1.2 | strength, 2.28.111.5 |
slide, 2.27.1.3 | structural, 2.27.3.4, 2.28.5 |
table, 2.27.1.4 | to sequence transfer, 2.28.111.1 |
row, 2.27.1.4 | text conversion, 2.28.145.3 |
addBfactor, 2.17.1 | weighted, 2.28.5 |
adding atoms to non-ICM objects, 2.27.7.1 | gapExtension, 2.17.15 |
columns to table, 2.27.1.1 | gapOpen, 2.17.16 |
hydrogens, 2.29.13 | alignment_as_text, 2.28.145.3 |
in place, 2.12.4 | aliphatic amines, 2.27.64.2 |
to slideshow, 2.27.1.3 | all, 5.1.2 |
admet selection, 3.13.3.4 | torsions table, 3.3.11 |
advanced chemical search, 3.6 | alpha, 2.21.5.51, 2.27.82.35, 5.1.3 |
operations, 2.12.6 | channel, 2.21.9.10 |
ops, 2.12.6 | alternative flag, 2.27.82.15 |
ali_seq_project, 2.28.145.4 | amber, 5.1.4 |
alias, 2.27.2 | amino acid, 2.19.24, 2.28.161, 2.28.162 |
align, 2.27.3 | labels, 2.27.3.1 |
3D, 2.27.3.4 | and, 2.12.3 |
faq, 3.3.2 | angles, 2.28.91.3 |
heavy, 2.27.3.5 | angular hbond dependence, 2.21.5.21 |
how to, 3.3.2 | animated story, 5.8.14 |
chemical, 2.27.81.1 | animation, 2.27.23.5, 2.27.23.6, 3.9 |
fragments, 2.27.3.3 | annotation, 2.27.82.23 |
intro, 1.4.3.3 | append, 5.1.5 |
number, 2.27.3.1 | a tables, 2.27.1.4 |
res numbers, 2.27.3.1 | column, 2.27.4.3 |
sequence, 2.27.3.2 | command, 2.27.4 |
sequences, 2.27.3.2 | sequence, 2.27.4.1 |
alignMethod, 2.20.2 | to group, 2.27.4.1 |
alignMinCoverage, 2.17.2 | stack, 2.27.4.2 |
alignMinMethod, 2.17.2 | tables, 2.27.48 |
alignOldStatWeight, 2.17.3 | by shared column, 2.27.4.3 |
alignSS, 2.29.1 | appending, 2.27.1.1 |
alignTwoSequences, 2.29.2 | an element, 2.12.4 |
aligned residues, 2.28.117 | menu items, 2.21.10.1 |
alignment, 5.1.1 | representations to a slide, 2.27.23.21 |
as table, 2.28.149.2 | rows to matrix, 2.27.1.2 |
block length, 2.16.21 | area under curve, 2.29.21 |
secondary structure, 2.29.1 | arguments, 2.27.58 |
cleaning, 2.28.135.4 | arithmetic operations, 2.12.2 |
color by property, 2.27.82.29 | arithmetics, 2.12 |
coloring, 2.19.1 | array, 2.27.66.4, 5.7.3.1 |
distance, 2.28.126.13 | assignment, 2.12.1 |
editor, 2.4 | derivative, 2.28.135.1 |
extraction, 2.28.5 | overlap, 2.28.125.1 |
gap format, 5.1.1.1 | parray, 2.27.22.29 |
intro, 1.4.3.4 | size, 2.28.91 |
projection, 2.28.145, 2.28.145.4, 2.28.145.5 | subset, 2.6 |
score, 2.28.125.5 | arrow from selection, 2.29.36 |
as2_out, 2.22.13 | site analysis, 3.4.2 |
as_, 2.8.8 | biological symmetry, 2.27.82.8 |
as_graph, 2.21.5.44, 2.21.5.45, 2.28.126.5 | vector, 2.28.59.3 |
as_out, 2.22.12 | to integers compression, 2.28.59.3 |
assign, 2.27.5 | blast files, 2.27.103.24 |
ring conformation to template, 2.27.60.4 | blast-formatted database, 2.27.34.3, 2.27.103.24 |
sstructure, 2.27.5.1 | blending, 2.27.103.30 |
segment, 2.16.19, 2.27.5.2 | images, 2.28.147.2 |
assignment, 2.12.1 | bold, 2.27.82.31.1 |
atom, 2.27.13.1, 5.1.6 | bond angle bending, 2.30.5 |
code file, 2.30.4 | errors, 2.27.83.11 |
coordinates, 2.28.180.1 | stretching, 2.30.6 |
flickering, 2.27.82.2 | to protein, 2.27.66.3 |
label font, 2.30.15 | bonded atoms, 2.28.90.1 |
name, 2.28.70 | born radii, 2.27.83.8 |
pairs, 2.27.82.59, 2.27.82.60, 2.28.149.9 | boundary element, 5.2.4 |
proximity to surface, 2.27.83.8 | matrix, 2.28.80.9 |
selection by number, 2.28.59.4 | box, 2.28.20 |
type, 2.28.170 | break, 2.27.6 |
user field, 2.28.47.1 | brightness, 2.21.5.28 |
atomLabelStyle, 2.20.3 | build, 2.27.7 |
atomSingleStyle, 2.20.4 | atom, 2.27.7.1 |
atomic coordinate transfer, 2.27.82.2 | column, 2.27.7.2 |
solvation contributions, 2.28.7 | faq, 3.8.1 |
in residue, 2.28.56 | from string, 2.27.7.7 |
alternative position, 2.27.82.15 | helix, 3.10.5 |
selecting, 2.8.8 | how to, 3.8.1 |
translate, 2.27.82.2 | hydrogen, 2.27.7.8 |
attenuation by occupancy, 2.27.59.25 | loop, 2.27.7.5 |
auc enrichment, 2.29.21 | model, 2.27.7.4, 2.27.103.9 |
auto saving log, 2.20.10 | molcart, 2.27.7.9 |
autoSavePeriod, 2.16.1 | sequence, 2.27.7.3 |
avi, 2.27.103.30 | smiles, 2.27.7.6 |
axis, 5.1.7 | string, 2.27.7.7 |
axisLength, 2.17.4 | built-in functions, 5.5.5 |
background, 2.28.28.2 | atoms, 2.27.14 |
ball, 5.2.2 | contact surface, 2.27.14 |
base, 5.2.1 | molecule, 2.27.13.1 |
basis set, 2.27.77.20, 2.27.103.17 | number of bonds, 2.28.126.3 |
batch chemical processing, 3.1.2.5 | variables, 2.27.14 |
docking, 3.13.2.6 | calcArea, 2.29.3 |
beta, 5.2.3 | calcBindingEnergy, 2.29.4 |
bfactor circles, 2.21.5.2 | calcDihedralAngle, 2.29.5 |
biased probability monte carlo, 2.27.65 | calcEnergyStrain, 2.29.20 |
binary file table of contents, 2.27.77.2 | calcEnsembleAver, 2.29.6 |
files, 2.27.103.2 | calcMaps, 2.29.7 |
key, 2.27.82.36 | calcPairSeqIdsFromAli, 2.29.8 |
binding energy, 3.7.4 | calcPepHelicity, 2.29.9 |
pocket finding, 3.4.2 | calcProtUnfoldingEnergy, 2.29.10 |
pockets, 2.27.85.1 | calcRmsd, 2.29.11 |
calc_nosauc, 2.29.21 | similarity, 3.5 |
calculate phases, 3.11.2 | spreadsheet, 2.27.12, 2.27.77.44, 2.27.77.45, 2.27.77.46, 2.27.82.40, 2.27.103.11 |
call, 2.27.8 | structure from smiles, 2.27.82.6 |
carboxylic acid, 2.27.64.2 | substructure, 2.27.34.4 |
cartesian cooridnates, 2.28.180 | mask, 2.27.59.21 |
cartridge, 3.5 | superposition, 2.20.6, 2.28.122 |
cavities, 2.27.85.1 | table, 2.23 |
cavity, 5.3.1 | view, 2.27.82.46 |
analysis, 3.3.13 | chemistry, 2.23, 2.28.26 |
ccp4 maps, 2.27.77.26 | chiral isomer generation, 2.27.29 |
cd, 2.27.82.18 | chirality, 2.18.16, 2.27.29 |
cell axis vectors, 2.28.180.7 | choosing ligands, 3.13.1.2 |
specific icm commands, 5.9.2.4 | cif, 2.27.77.44 |
center, 2.11.1, 2.27.9 | circular permutation of coordinates, 2.27.63 |
chain breaks, 2.21.5.6, 2.21.5.7, 2.28.126.1 | clamp values to range, 2.28.167 |
symbol, 2.27.82.8 | clashThreshold, 2.17.5 |
change atom position, 2.27.82.2 | labels, 2.28.155 |
sequence position in multiple alignment, 2.27.66.6 | clear, 2.27.10 |
unix directory, 2.27.82.18 | graphical selection, 2.27.10 |
changing local stick radii, 2.27.82.77 | screen, 2.27.10 |
surface dot size, 2.21.5.48 | click and lock, 5.9.2.4 |
channel, 2.21.14.2 | clipping plane, 2.21.5.8, 5.3.3 |
charge, 5.3.2 | closer than threshold, 2.28.38.7 |
compounds, 2.27.64.2 | closest sequence, 2.28.88.3 |
change, 2.27.82.9 | value, 2.28.49.1 |
chem formula, 2.28.145.9 | cluster, 2.28.143.1 |
chemSuper3D, 2.29.22 | center, 2.28.62.8 |
chemical, 2.23, 2.27.34.9 | centers, 2.11.1 |
2D drawings, 2.27.59.9 | selection, 2.28.62.8 |
SMARTS search, 2.27.34.5 | tree, 2.28.88.5 |
database, 3.5 | size, 2.28.91.1 |
decomposition, 2.27.59.27, 2.27.85.2 | clustering, 2.11, 2.27.59.35, 2.27.85.7 |
descriptors, 5.7.12 | clusters, 2.11, 2.11.1 |
diversity, 3.14.6.3 | cnMethodAverage, 2.20.5 |
drawing, 2.21.9.14 | cnWeight, 2.17.6 |
quality, 2.21.9.15 | coil, 5.3.4 |
formula, 2.28.145.9 | collection, 2.10, 5.3.6 |
fragment counting, 2.28.91.2 | color, 2.21.5.28, 2.27.11 |
keys, 2.27.59.21 | accessibility, 2.27.13 |
match coordinates, 2.28.180.5 | background, 2.27.13.2 |
matching, 2.27.34.4, 2.27.77.45, 2.27.77.46, 2.28.122, 2.28.144 | example, 3.2.7 |
models, 2.28.88.1 | accessibility, 3.2.11 |
modification, 2.27.62, 2.27.64, 2.29.37 | alignment, 2.27.13.3 |
name, 2.28.88.6 | atom contributions, 2.27.12 |
normalization, 2.27.64 | bfactor, 3.2.9 |
rules, 2.27.64.4 | charge, 3.2.12 |
pattern, 2.24, 2.27.81.1 | electrostatic potential, 2.16.5 |
search, 2.28.49.3 | hydrophobicity, 3.2.10 |
reaction product generation, 2.27.59.32 | pharmacophore, 2.27.12 |
search, 2.27.34.10, 2.27.81.1, 2.28.91.2 | potential, 2.29.25 |
chemical, 2.27.12, 2.27.81.1 | array, 2.23 |
file, 2.30.15 | compress, 2.27.15 |
grob, 2.27.13.4 | binary, 2.27.15.3 |
by atom selection, 2.27.13.4.3 | conf, 2.27.15.2 |
atoms, 2.21.7.1 | grob, 2.27.15.1 |
map, 2.27.13.4.4 | in place, 2.27.15.3 |
matrix, 2.27.13.4.2 | objects, 2.27.15 |
potential, 2.27.13.4.5 | stack, 2.27.15.2 |
unique, 2.27.13.4.1 | compressed table view, 2.27.82.21 |
label, 2.27.13.5 | conditional buttons, 5.5.5 |
map, 2.27.13.6 | string, 2.28.145.6 |
by value, 2.27.23.16 | conf, 2.27.82.52, 2.27.103.40, 2.28.149.6, 5.3.12, 5.8.9 |
molecule, 2.27.13.1 | data, 2.28.149.6 |
names, 2.28.28 | confgen, 3.13.2.3 |
object, 2.27.11.2 | configuration, 2.30.14 |
specification, 2.27.11.1 | memory usage, 2.16.6 |
surface by conservation, 2.27.13.3 | conformation comparison, 2.20.6 |
volume, 2.27.13.7 | conformational generator, 2.27.60.1, 3.13.2.3 |
column, 5.3.5 | interpolation, 2.27.23.6 |
function, 2.27.7.2 | stack, 2.27.103.40, 5.3.12, 5.8.9 |
selection, 2.28.88 | compression, 2.27.15.2 |
combinatorial compounds, 2.28.26 | file, 2.30.7 |
libraries, 2.27.59.32, 2.28.91.4 | transition, 2.29.38 |
PDB, 2.29.90 | conformer storage, 2.27.57.5, 2.27.87.2 |
transformations, 3.10.4 | conformers, 3.13.2.3 |
combining plots, 2.27.59.31 | connect, 2.27.16 |
receptor and ligand stacks, 2.27.4.2 | chains with alignments, 2.27.52 |
command, 2.28.88.4, 5.3.10 | molcart, 2.27.16.1 |
line editing, 2.2 | consensus, 2.17.7 |
help, 2.27.43 | coloring, 2.17.9, 2.21.2 |
options, 2.1 | definitions, 2.21.1 |
word list, 3.1.5 | consensusStrength, 2.17.7 |
commands, 2.20.10 | conservation, 2.28.111.5, 2.28.125.5 |
communication protocols, 2.25 | constant, 2.5 |
comp, 2.28.94 | constants, 2.5 |
comp_matrix, 2.27.82.17, 2.27.83.15, 5.3.11 | contact areas, 2.28.80 |
compare, 2.16.11, 2.16.14, 2.27.14 | continue, 2.27.17 |
angles, 2.27.14.2 | contour surfaces, 2.21.7.5 |
atom, 2.27.14.1 | contouring density, 2.27.59.14 |
by rmsd without superposition, 2.27.14.1 | contrast, 2.21.5.28 |
chemical tables, 2.27.34.10 | conversion to real array, 2.28.157 |
patch only, 2.27.14.3 | convert, 2.27.18, 2.27.18.2, 3.13.2 |
rmsd, 2.27.14.1 | 3D to chemical, 2.28.26 |
surface, 2.27.14.3 | 3D/0D to 2D, 2.27.59.9 |
variables, 2.27.14.2 | ICM object to PDB, 2.27.89 |
compareMethod, 2.20.6 | and reroot, 2.27.18.4 |
comparing two sarrays, 2.28.94 | chemical 3D, 2.29.81 |
comparison operations, 2.12.5 | and optmimize geometry, 2.29.82 |
complete view, 2.28.133 | comp, 2.27.18.1 |
compound accessibilities, 3.14.4.1 | comparison, 2.27.18.1 |
mol, 2.27.18.3 | working directory, 2.28.97 |
object 3D and optmimize geometry, 2.29.83 | cursor action, 5.9.2.4 |
macro, 2.29.13 | custom field, 2.27.82.44 |
pdb, 3.8.2 | interaction, 2.27.83.35 |
to 3D, 2.27.82.7 | customization, 3.1.2 |
ICM object, 2.29.84 | and paste chemicals, 2.21.9.14, 2.21.9.15 |
iarray, 2.28.155 | cyclic temperature protocol, 2.17.43 |
icm-object, 2.27.18 | cylinder, 2.21.14.2 |
integer, 2.28.155 | cz32, 4.5 |
convert2Dto3D, 2.29.83 | database, 5.4.1 |
convert3Dto3D, 2.29.84 | browser, 2.27.57.3 |
convertObject, 2.29.13 | connection, 2.27.16.1 |
converting a chemical, 2.27.18.3 | file, 3.5.1 |
pdb-chemical, 3.13.2 | import, 2.27.59.26 |
alignment to table, 2.28.149.2 | date, 2.27.21 |
chemicals, 3.13.2.4 | array, 2.27.21 |
table columns into matrix, 2.28.80.5 | dcMethod, 2.20.7 |
to, 2.28.112 | dcWeight, 2.17.8 |
cool, 2.29.40 | decomposition, 2.27.59.27, 2.27.85.2 |
pictures, 2.21.5.25 | defCell, 2.22.1 |
cooling schedule, 2.17.43 | defSymGroup, 2.16.2 |
coordinate frame, 2.17.4, 2.27.23.4 | default atom colors, 2.27.82.13 |
copy, 2.27.19 | value, 5.8.2 |
chemical image, 2.21.9.15 | define axis, 3.10.3 |
file, 2.19.26 | defining space box, 2.28.20 |
site, 2.27.82.24 | dehtml, 2.28.115.3 |
correlation matrix, 2.28.152 | delete, 2.27.22 |
covalent bound count, 2.28.126.3 | 3D graphics panel, 2.27.98 |
neighbors, 2.28.90.1 | alias, 2.27.22.2 |
covalently attached molecule, 2.28.90.1 | array element, 2.27.22.6 |
cpk, 5.3.13 | index, 2.27.22.6 |
create a covalent bond, 2.27.59.2 | selection, 2.27.22.1 |
pharmacophore, 2.29.85 | atom, 2.27.22.7 |
creating a local patch object, 2.27.18.2 | bond, 2.27.22.14 |
credits, 4.5 | boundary, 2.27.22.15 |
crypt, 2.27.20 | chemical, 2.27.22.35 |
crystal axis vectors, 2.28.16 | fragment, 2.27.22.35 |
symmetry transformation, 3.10.2 | selection, 2.27.22.35 |
transformations, 2.28.165 | class, 2.27.22 |
crystallographic cell, 2.27.63 | conf, 2.27.22.16 |
occupancy, 2.28.96 | directory, 2.27.22.8 |
symmetry intro, 1.4.2.4 | disulfide bond, 2.27.22.25 |
crystallography, 2.28.118 | drestraint, 2.27.22.17 |
csv format, 2.27.77.41 | element, 2.27.22.29 |
csym, 1.4.2.4 | file, 2.27.22.9 |
cube, 2.21.14.2 | from array, 2.27.22.6 |
current, 5.3.9 | hydrogen, 2.27.22.11 |
icm-process number, 2.16.4 | label, 2.27.22.18, 2.27.22.19 |
map, 5.3.7 | chemical, 2.27.22.19 |
object, 5.3.8 | link, 2.27.22.20 |
molcart, 2.27.22.3 | display, 2.27.23 |
molecule, 2.27.22.13 | GUI window, 2.27.23.26 |
object, 2.27.22.12 | box, 2.27.23.7 |
parray, 2.27.22.34 | clash, 2.17.5, 2.27.23.8 |
element, 2.27.22.34 | drestraint, 2.27.23.9 |
peptide bond, 2.27.22.26 | field, 2.21.5.2 |
plot, 2.27.22.4 | from script, 2.27.23.3 |
salts, 2.27.64.3 | gradient, 2.27.23.10 |
selection, 2.27.22.5 | grob, 2.27.23.11 |
selftether, 2.27.22.32 | label, 2.27.23.12 |
sequence, 2.27.22.22 | gui, 2.27.23.26 |
session, 2.27.22.10 | hbond, 2.27.23.13 |
shell object, 2.27.22.1 | label, 2.27.23.15 |
site, 2.27.22.23 | map, 2.21.5.10, 2.27.23.16 |
sstructure, 2.27.22.24 | model, 2.27.23.1 |
stack, 2.27.22.27 | new, 2.27.23.2 |
object, 2.27.22.28 | off-screen, 2.27.23.3 |
system, 2.27.22.9 | offscreen, 2.27.23.3 |
table, 2.27.22.30 | origin, 2.27.23.4 |
rows, 2.27.22.30 | ribbon, 2.27.23.18 |
term, 2.27.22.31 | rotate, 2.27.23.5 |
tether, 2.27.22.33 | site, 2.27.23.19 |
tree, 2.27.22.34 | skin, 2.27.23.20 |
variable, 2.27.22.6 | slide, 2.27.23.21 |
views, 2.27.22 | stack, 2.27.23.6 |
backbone, 2.28.126.1 | string, 2.27.23.22 |
restraint, 2.27.22.17 | surface, 2.27.23.20 |
deleting sites by number, 2.27.22.23 | area, 2.21.5.2 |
delphi, 2.29.25 | tethers, 2.27.23.23 |
density correlation, 2.17.8, 3.11.3 | trajectory, 2.27.23.17 |
fitting, 2.20.7 | volume, 2.27.23.24 |
in unit cell, 2.27.59.23 | window, 2.3, 2.27.23.25 |
densityCutoff, 2.17.10 | distance, 2.21.5.19, 5.4.3 |
dependent columns, 2.27.1.1.1 | averaging, 2.20.5 |
depth cueing, 2.27.13.7, 5.4.2 | contact-based, 2.28.22, 2.28.22.1 |
depth-cueing, 2.17.14 | geometry, 5.4.4 |
desolvation, 2.20.24 | matrix, 2.28.149.5, 2.29.8 |
detecting bad covalent geometry, 2.27.83.11 | between stack conformations, 2.28.80.10 |
proximity, 2.28.38.7 | restraint, 5.4.6 |
dialog generation, 2.28.11 | file, 2.30.9 |
in html documents, 2.27.42 | type file, 2.30.8 |
tables, 2.27.42 | restraints, 2.27.82.19 |
scripting, 2.28.11 | distances, 2.28.91.3 |
dielConst, 2.17.11 | distribution, 1.3 |
dielConstExtern, 2.17.12 | comparison, 2.28.125 |
dielectric constant, 2.17.11 | disulfide bond, 5.4.5 |
diff, 2.28.94 | diverse subset, 3.14.6.3 |
dihedral angle, 2.27.59.19 | dividing chemical into individual molecules, 2.28.143.4 |
calculation, 3.3.10 | dna to protein sequence translation, 2.28.164.1 |
directory, 2.27.22.8, 2.27.59.5, 2.28.124 | translate, 2.28.164.1 |
docking, 2.29.87 | intro, 1.4.2.9 |
intro, 3.13.2.1 | ellipsoid, 2.28.152 |
result viewing, 2.29.28 | elseif, 2.27.25 |
simple models, 3.14.3 | endfor, 2.27.26 |
timing, 3.13.1.3 | endif, 2.27.27 |
with template, 3.13.2.7 | endmacro, 2.27.28 |
documents, 5.5.8 | endwhile, 2.27.32 |
dominant color, 2.28.28.2 | energetics, 3.7 |
donor, 3.6.1 | function, 2.21.14.3 |
plot intro, 1.4.3.2 | terms, 2.15 |
dots, 2.27.71 | ensemble average, 3.7.5 |
dotted surface, 2.21.5.50 | entropy of alignment, 2.28.125.5 |
double click action, 5.9.2.4 | atom, 2.27.18.4 |
drestraint, 2.27.83.17, 5.4.6 | enumerate, 2.27.29, 2.27.30, 2.27.31 |
generate from structure, 2.27.59.7 | chiral, 2.27.29 |
global weight, 2.17.6 | library, 2.27.31 |
set, 2.27.82.19 | tautomer, 2.27.30 |
type, 5.4.7 | enumeration, 2.28.26 |
drop, 2.17.13 | eps files, 2.19.23 |
drug, 2.10 | error SOAP services, 2.28.42 |
ds3D, 2.29.31 | ignoring, 2.19.25 |
dsCellBox, 2.29.15 | error/warning bits cleanup, 2.27.10 |
dsChem, 2.29.17 | errorAction, 2.20.9 |
dsCustom, 2.29.18 | vrestraint vs_var, 2.27.82.73 |
dsPocket, 2.29.28 | evalSidechainFlex, 2.29.88 |
dsPropertySkin, 2.29.19 | evol tree intro, 1.4.3.5 |
dsPrositePdb, 2.29.24 | evolutionary tree intro, 1.4.3.5 |
dsRebel, 2.16.5, 2.29.25 | exact, 2.27.34.9, 2.27.34.10 |
dsSeqPdbOutput, 2.29.26 | match, 2.28.115.1 |
dsSkinLabel, 2.29.27 | example scripts, 3.14 |
dsStackConf, 2.29.29 | exit, 2.27.33 |
dsVarLabels, 2.29.30 | exitSeslogStyle, 2.20.10 |
dsXyz, 2.29.32 | expanding substructure match, 2.27.82.61 |
dump database, 2.27.103.7 | export, 2.27.103.7 |
dynamic gui, 5.5.5 | animation, 2.27.103.30 |
ecepp, 5.5.1 | pdb, 2.21.14.11 |
edit, 2.27.24 | exporting sdf, 2.27.103.11 |
files, 2.21.14.1 | expression shortcuts, 2.9.1.2 |
electro intro, 1.4.2.9 | comparison, 2.12.5 |
electroMethod, 2.20.8 | arithmetics, 2.12.2 |
density, 2.21.7.5, 2.29.42, 2.29.43 | assignment, 2.12.1 |
around selection, 2.17.22 | comparison, 2.12.5 |
map generation, 2.17.1 | logical, 2.12.3 |
maps, 2.21.14.1 | extending to bonded hydrogens, 2.28.126.6 |
electrostatic boundary matrix, 2.28.80.9 | terminal atoms, 2.28.126.6 |
isopotential surfaces, 2.27.59.13 | external process, 2.27.59.1 |
potential, 2.27.13.4.5 | extracting from Markush, 2.27.50 |
solvation, 3.7.2 | icm script arguments, 2.28.52 |
surface, 2.29.25 | stack from object, 2.27.57.5 |
troubleshooting, 5.7.13 | ez25, 3.7 |
false negatives, 2.28.125.2 | findSymNeighbors, 2.29.16 |
family, 2.27.82.31.1 | find_related_sequences, 2.29.33 |
faq, 1.3 | finding long covalent bonds, 2.28.126.1 |
cheminformatics, 3.14.6 | to density, 2.20.7 |
chemsuper, 3.14.5 | fix, 2.27.35 |
molcart dump, 3.14.6.2 | fixed branches, 2.28.126.2 |
query, 3.14.6.1 | flattening 3D molecule, 2.29.17 |
multiple chem overlay, 3.14.5.1 | flow control, 2.13 |
residue table, 3.14.4.1 | fog, 2.17.14, 2.27.13.7, 2.27.23.24, 5.4.2 |
fast Fourier transform, 2.27.59.24 | color, 2.17.14 |
sequence search, 2.27.34.3 | fogStart, 2.17.14 |
fasta, 2.21.12.14, 5.5.2 | fold search, 5.8.4 |
format, 2.27.103.1 | foldbank.db, 2.30.3 |
feature table, 2.28.149.8 | folding procedure, 3.14.1 |
in sequences, 2.27.82.23 | font, 2.27.53.1 |
ffMethod, 2.20.11 | size, 2.27.82.31.1, 2.30.14 |
field name, 2.28.88.2 | specification, 2.27.82.31.1 |
file, 2.27.103.23 | for, 2.27.36 |
exists, 2.28.43 | fork, 2.27.37 |
list, 2.28.52 | formal charge, 2.21.5.16, 5.3.2 |
length, 2.28.48 | formatdb, 2.27.103.24 |
object origin, 2.28.48 | fprintf, 2.27.38 |
permissions, 2.28.48 | fractional coordinates, 2.28.180.3 |
time modified, 2.28.48 | to abs coordinates, 2.28.16 |
type, 2.28.48 | fragmented molecule, 2.27.18.2 |
files, 2.30 | frame, 2.27.87, 2.27.103.30 |
filling volume, 2.21.5.8 | fullscreen, 2.27.82.76 |
filter, 2.27.34.10, 2.27.57.3 | function, 2.27.58 |
functions, 5.5.4 | columns, 2.27.1.1.1 |
filtering table rows, 5.5.4 | selecting in objects, 2.8.10 |
find, 2.27.34 | gamess, 5.5.6 |
alignment, 2.27.34.1 | expansion, 2.28.135.4 |
and replace a chemical pattern, 2.27.64.1 | gapExtension, 2.17.15 |
chemical fragment, 2.27.64 | gapFunction, 2.22.3 |
chemical, 2.27.34.5 | gapOpen, 2.17.16 |
pattern, 2.27.64 | gaussian averaging, 2.28.135.2 |
substructure, 2.28.62.1 | gcMethod, 2.20.12 |
database, 2.17.2, 2.27.34.2 | genbank, 2.21.12.14 |
fast, 2.27.34.3 | generate intermediate conformers, 2.29.38 |
family of commands, 2.27.34 | generating movie images, 3.9.2.1 |
in sarray, 2.28.62.7 | genomics, 1.4.3.1 |
molcart, 2.27.34.9, 3.5 | clustering, 2.27.41.2 |
molecule, 2.27.34.4 | intro, 1.4.3.1 |
pattern, 2.27.34.8 | geometry optimization, 2.27.60.1 |
pdb, 2.27.34.6 | started, 1.7 |
pharmacophore, 2.27.34.11 | getting data from outside, 2.25 |
prosite, 2.27.34.7 | started, 1.7 |
table, 2.27.34.10 | global, 2.27.39 |
findFuncMin, 2.29.33, 2.29.34 | glossary, 5 |
findFuncZero, 2.29.35 | goto, 2.27.40 |
gpWeights, 2.17.17 | header, 2.27.1.1 |
graph matching, 2.28.122 | helical axis, 2.29.36 |
graphical box, 2.27.23.7 | cylinders, 2.21.5.37 |
row selection, 2.28.62.4 | helicity, 3.7.6 |
selection, 2.28.126.5 | content calculation, 3.7.6 |
graphics, 2.27.82.3, 2.28.176, 3.2, 5.3.3 | help, 2.27.43, 2.27.43.1, 2.27.43.2 |
card, 2.21.5.46 | browser, 2.27.43.1 |
controls, 2.3, 2.30.15, 5.4.2 | commands, 2.27.43.3 |
exists, 2.28.43 | functions, 2.27.43.4 |
intro, 1.4.1, 1.4.1.4 | getting, 3.1.1 |
learning, 3.2.1 | word, 2.27.43.2 |
attributes, 2.17.4 | getting, 3.1.1 |
fogStart, 2.17.14 | heterogenous environment, 2.21.14.2 |
view vector, 2.27.82.71 | hidden blocks, 5.1.1.1 |
greedy matching, 2.9.1.4 | display, 2.27.23.3 |
grid potentials, 2.27.59.25 | hydrogens, 2.21.5.27 |
grob, 5.5.3 | stack in object, 2.27.87.2 |
coloring, 2.27.13 | hierarchical, 2.11 |
files, 2.30.10 | highEnergyAction, 2.20.13 |
inside-out flip, 2.27.82.35 | his-tags, 2.28.168 |
normal directions, 2.27.82.35 | histogram, 2.27.59.31 |
translate, 2.27.96 | 2D, 2.28.80 |
group, 2.27.41 | history, 2.27.44, 2.27.103.39 |
by column, 2.27.41.4 | delete, 2.27.22.10 |
column, 2.27.41.4 | of ICM, 1.2 |
replacement, 2.27.62 | homodel, 2.29.41 |
sequence, 2.27.41.1 | homology modeling, 1.4.2.2, 2.27.7.4, 2.27.82.59, 2.27.82.60, 2.29.1, 3.14.4 |
unique, 2.27.41.2 | faq, 3.14.4 |
table, 2.27.41.3 | intro, 1.4.2.2 |
grouping table by a column, 2.27.82.21 | output, 2.27.7.4.3 |
gui, 2.27.42, 5.9.2.4 | steps, 2.27.7.4.1 |
exists, 2.28.43 | to export a molcart table, 3.14.6.2 |
functions, 5.5.5 | html, 2.27.42, 2.28.88.4, 5.5.8 |
panels, 2.27.98 | document order, 2.27.82.33 |
programming, 2.26, 2.27.42, 2.27.82.21 | tag removal, 2.28.115.3 |
gzip files, 2.27.15.3 | html-formatted text, 5.5.8 |
hash, 2.10 | hydration, 2.21.14.2, 2.28.7 |
table, 5.3.6 | parameters, 2.30.13 |
haze, 2.17.14 | hydrogen bond, 2.21.5.20, 2.21.5.21, 2.27.59.17, 5.5.7 |
hb, 2.17.18 | bonding parameters, 2.30.12 |
hbCutoff, 2.17.18 | cutoff, 2.17.18 |
hbond, 2.21.5.20, 2.21.5.21, 2.27.22.6, 5.5.7 | bonds, 2.28.91.3 |
color, 2.27.23.14 | display, 2.21.5.27 |
display, 2.21.5.22, 2.21.5.23 | placement, 2.27.82.22 |
energy, 2.27.23.14 | hydrophobicity profile, 3.3.12 |
list, 2.28.149.9 | iProc, 2.16.4 |
show, 2.27.83.21 | iSee, 5.8.14 |
hbondMinStrength, 2.21.5.20 | i_out, 2.16.3 |
faq, 3.3.4 | iarray, 2.27.22.6, 2.28.49.1, 2.28.59.2, 2.28.62.7, 5.6.1 |
how to, 3.3.4 | making, 2.28.59.1 |
interaction cutoff, 2.18.27 | l_showWater, 2.18.25 |
lists, 2.18.27, 2.21.14.3 | l_updateLists, 2.18.27 |
interactive docking, 1.4.2.8 | l_warn, 2.18.28 |
interatomic potential, 2.27.82.44, 2.27.83.35 | l_wrapLine, 2.18.29 |
interface comparison, 2.27.14.3 | l_writeStartObjMC, 2.18.30 |
residues, 3.3.5 | l_xrUseHydrogen, 2.18.31 |
torsions, 3.3.7 | label, 2.27.23.22, 5.6.3 |
view, 2.29.28 | fonts, 2.30.15 |
intermolecular bond, 2.27.66.3 | latent, 2.28.91.6 |
internal coordinate file, 2.30.21 | learn, 2.27.49 |
coordinates, 2.8.9 | atom, 2.27.49.1 |
positional restraints, 5.9.4 | left join, 2.27.48 |
interpolate, 2.28.28.1 | triangle of a matrix, 2.28.80.3 |
interpolation, 2.28.28.1 | library to replacement groups, 2.27.59.27, 2.27.85.2 |
interruptAction, 2.20.14 | ligand binding, 2.29.28 |
inverting array order, 2.28.59.2, 2.28.111.2 | dock faq, 3.13.2 |
italic, 2.27.82.31.1 | docking, 3.13, 3.13.1, 3.13.2 |
iterative overlay, 2.27.90 | intro, 1.4.2.6 |
superposition, 2.21.14, 2.27.91 | editing, 1.4.2.8 |
join, 2.27.48 | editor, 2.29.37 |
tables, 2.27.48 | fit, 3.13 |
keep, 2.27.47 | setting, 3.13.2 |
kernel models quality, 2.28.125.2 | view, 2.21.5.26 |
mapping, 2.30.15 | light, 2.21.5.29 |
kmz, 5.5.3 | limits, 2.30.14 |
l_antiAlias, 2.18.1 | line thickness in 2D chemicals, 2.21.9.14 |
l_autoLink, 2.18.2 | lineWidth, 2.17.19 |
l_bpmc, 2.18.3 | linear chemical notation, 2.24 |
l_breakRibbon, 2.18.4 | regression, 2.28.74 |
l_bufferedOutput, 2.18.5 | group, 2.27.50 |
l_bug, 2.18.6 | internal variables of molecular object, 2.27.51 |
l_caseSensitivity, 2.18.7 | ms2ali, 2.27.52 |
l_commands, 2.18.8 | sequences to 3D objects, 2.27.52 |
l_confirm, 2.18.9 | to alignment, 2.27.52 |
l_easyRotate, 2.18.10 | variable, 2.27.51 |
l_info, 2.18.11 | variables, 2.27.51 |
l_minRedraw, 2.18.12 | linked alignment, 2.28.88 |
l_neutralAcids, 2.18.13 | sequence, 2.28.88 |
l_out, 2.18.14 | linux shell, 2.27.92, 5.10.2 |
l_print, 2.18.15 | list, 2.27.53 |
l_racemicMC, 2.18.16 | binary, 2.27.54 |
l_readMolArom, 2.18.17 | database, 2.27.55 |
l_showAccessibility, 2.18.18 | font, 2.27.53.1 |
l_showMC, 2.18.19 | html documents, 2.28.88 |
l_showMinSteps, 2.18.20 | molcart, 2.27.56 |
l_showResCodeInSelection, 2.18.21 | database, 2.27.56 |
l_showSites, 2.18.23 | of files, 2.28.124 |
l_showSpecialChar, 2.18.22 | updates, 2.27.60 |
l_showSstructure, 2.18.24 | listUpdateThreshold, 2.17.20 |
l_showTerms, 2.18.26 | literature, 4.1 |
conf, 2.27.57.1 | hbond, 2.27.59.17 |
frame, 2.27.57.2 | image, 2.27.59.20 |
molcart, 2.27.57.3 | key, 2.27.59.21 |
object, 2.27.57.6 | map, 2.27.59.22 |
solution, 2.27.57.4 | cell, 2.27.59.23 |
stack object, 2.27.57.5 | factor, 2.27.59.24 |
loadEDS, 2.29.42 | potential, 2.27.59.25 |
loadEDSweb, 2.29.43 | xray, 2.27.59.30 |
local, 3.5.1 | molcart, 2.27.59.26 |
logarithm, 2.28.75 | molsar, 2.27.59.27 |
logical, 5.6.4 | pca, 2.27.59.28 |
operations, 2.12.3 | peptide bond, 2.27.59.29 |
variables, 2.18 | plot, 2.27.59.31 |
logical_ops, 2.12.3 | reaction, 2.27.59.32 |
logicals, 2.18 | sequence, 2.27.59.34 |
long axes, 2.28.152 | alignment, 2.27.59.33 |
loop database rebuilding, 2.27.103.27 | from alignment, 2.27.59.33 |
interrupt, 2.17.44 | torsion, 2.27.59.19 |
modeling, 1.4.2.3 | tree, 2.27.59.35 |
intro, 1.4.2.3 | unique, 2.27.59.36 |
search, 2.27.7.4.2 | makeAxisArrow, 2.29.36 |
resolution shape, 2.29.86 | makeIndexChemDb, 2.29.44 |
ma29, 3.11 | makeIndexSwiss, 2.29.45 |
macro, 2.27.58, 5.6.5 | makePdbFromStereo, 2.29.46 |
macro_def, 5.6.5 | makePharma, 2.29.85 |
main ICM references, 4.2 | makeSimpleDockObj, 2.29.47 |
concepts, 3.10.1 | makeSimpleModel, 2.29.48 |
make, 2.27.59 | making predictive models, 2.27.49 |
3d label, 2.27.59.15 | manual style, 1.5 |
angle, 2.27.59.18 | map, 2.17.22, 2.21.5.10, 5.6.6 |
background, 2.27.59.1 | aa property to sequence, 2.28.111.1 |
bond, 2.27.59.2 | averaging, 2.28.135.5 |
chain, 2.27.59.3 | calculation, 2.27.59.24 |
multi, 2.27.59.3 | conversion, 2.27.59.30 |
boundary, 2.27.59.4 | file, 2.30.16 |
directory, 2.27.59.5 | fitting, 2.20.7 |
distance, 2.27.59.16 | format, 5.6.6 |
disulfide bond, 2.27.59.6 | mean value, 2.28.83 |
drestraint, 2.27.59.7 | min value, 2.28.84 |
factor, 2.27.59.8 | name, 2.28.76 |
flat, 2.27.59.9 | operations, 5.6.6 |
chem_array, 2.27.59.9 | transformations, 2.28.135.5 |
grob, 2.29.36 | trimming, 2.28.21 |
from image, 2.27.59.11 | value sigma, 2.28.122 |
matrix, 2.27.59.12 | contouring, 2.27.59.14 |
image, 2.27.59.11 | mapAtomMargin, 2.17.22 |
map, 2.27.59.10 | mapSigmaLevel, 2.17.21 |
matrix, 2.27.59.12 | mapping properties to sequence, 2.28.111.4 |
potential, 2.27.59.13 | and factors, 3.11 |
skin, 2.27.59.14 | mass-spectrometry functions, 2.27.29, 2.27.30, 2.27.31 |
hydrogens, 2.27.82.61 | triangles, 2.28.177 |
matrix, 5.6.7 | mkUniqPdbSequences, 2.29.49 |
derivatives, 2.28.71 | mm26, 3.8 |
new, 2.28.80.1 | mmcif, 5.6.10 |
map value, 2.28.81 | mmff, 5.6.9 |
maxColorPotential, 2.16.5 | type, 2.28.170 |
maxMemory, 2.16.6 | show atom types, 2.27.83.10 |
movie, 3.9.2 | mnSolutions, 2.16.8 |
mcBell, 2.17.23 | mncalls, 2.16.9 |
mcJump, 2.17.24 | mncallsMC, 2.16.10 |
mcShake, 2.17.25 | mnconf, 2.16.11 |
mcStep, 2.17.26 | mnhighEnergy, 2.16.12 |
mean force, 2.27.82.44, 2.27.83.35 | mnreject, 2.16.13 |
membrane, 2.21.14.2 | mnvisits, 2.16.14 |
memorizing positions, 3.2.4 | model reliability, 2.29.23 |
menu, 2.27.61 | modify, 2.27.62 |
script, 3.1.3 | and reroot, 2.27.18.4 |
merge PDB, 2.29.90 | chem, 2.27.64 |
arrays to table, 2.27.41.3 | charge, 2.27.64.2 |
continuation lines, 2.27.77.37 | delete salt, 2.27.64.3 |
objects, 2.27.66.2 | normalize, 2.27.64.4 |
parts of molecule, 2.27.66.3 | chemical find replace, 2.27.64.1 |
pdb, 3.4.4 | molcart, 2.27.64.5 |
sarray into string, 2.28.147 | rotate, 2.27.63 |
stacks, 3.7.7 | modifyGroupSmiles, 2.29.37 |
tables, 2.27.4.3, 2.27.48 | modules, 1.4.4 |
merge2, 3.8.7 | mol, 2.27.77.45, 2.27.77.46, 2.27.103.11, 2.27.103.23, 5.6.11 |
mergePdb, 2.29.90 | file, 2.28.145.2 |
several chemical, 2.28.147.1 | to icm, 2.27.18.3 |
merging into one molecule, 2.27.66.3 | translation, 3.2.4 |
mesh, 2.28.177 | mol-file to chem-table element, 2.28.98 |
score, 3.13.3.3 | mol2, 5.6.12 |
mfMethod, 2.20.15 | molcart, 2.27.16.1, 3.5 |
mfWeight, 2.17.27 | connection options, 3.5.2 |
mimel, 5.6.8 | molecular, 2.28.51, 5.7.3.1 |
mimelDepth, 2.17.28 | arrays, 5.7.3 |
mimelMolDensity, 2.17.29 | manipulations, 3.8 |
minNumGrad, 2.27.60 | modifications, 3.8.5 |
minTetherWindow, 2.16.7 | object, 5.7.1 |
minimization exit criteria, 2.27.60 | objects, 2.14 |
minimize, 2.16.9, 2.27.60 | surface, 2.27.83.8, 5.8.7 |
cartesian, 2.27.60.1 | views, 1.4.1.1 |
loop, 2.27.60.2 | volume, 2.28.103 |
stack, 2.27.60.3 | molecule, 2.7 |
tether, 2.16.7, 2.27.60.4 | create, 3.8.4 |
drop, 2.17.13 | properties, 2.27.82.29 |
minimizeMethod, 2.20.16 | rotation, 3.2.3 |
missing bonds, 2.27.66.3 | translation, 3.2.3, 3.2.4 |
loop, 2.21.5.6, 2.21.5.7 | create, 1.7.2 |
residues, 2.28.47.1 | intro, 1.7.2, 2.7 |
selecting, 2.8.6 | nProc, 2.16.17 |
monte carlo, 2.27.65 | nSsearchStep, 2.16.16 |
montecarlo, 2.16.10, 2.16.12, 2.16.13, 2.16.14, 2.16.18, 2.20.6, 2.27.65 | name, 2.28.70 |
local, 2.16.15 | atom fields, 2.27.82.29 |
trajectory, 2.27.23.17 | naming compounds, 2.27.82.40 |
moprphing, 2.29.38 | nearest sequence, 2.28.84 |
more, 5.6.13 | nested script, 5.8.2 |
morph, 2.27.23.6 | nice, 2.29.39 |
to tether target, 2.29.38 | image, 3.2.2 |
morph2tz, 2.29.38 | non-redundant, 3.4.3 |
morphing, 2.27.23.6, 2.27.82.59, 2.27.82.60, 2.27.87.3 | normal distribution, 2.28.110 |
mouse controls, 2.3 | normalize chemicals, 2.27.64.4 |
file, 2.27.103.30 | defined, 2.28.157 |
move, 2.27.66 | nota, 1.5 |
alignment sequence, 2.27.66.6 | notational conventions, 1.5 |
atoms, 2.27.82.2 | nucleotides, 2.19.24 |
bonding, 2.27.66.3 | number of dots, 2.21.5.49 |
column, 2.27.66.5 | elements, 2.28.91 |
element, 2.27.66.4 | hydrogen bonds, 2.27.83.21 |
file, 2.19.28, 2.27.78.3 | molecules in objects, 2.28.126.4 |
fragments together, 2.27.66.3 | occurrences, 2.28.91 |
molecule, 2.27.66.1 | residues in molecules, 2.28.126.4 |
ms_molecule, 2.27.66.1 | van der Waals contacts, 2.27.83.12 |
multiple molecules, 2.27.66.2 | transfer from sequence, 2.27.3.1 |
object, 2.27.66.2 | nvis, 2.28.59.6 |
sequence, 2.27.66.6 | object, 2.27.13.1, 5.7.1 |
table column, 2.27.66.5 | parray, 5.7.3.1 |
movie, 2.27.87.3 | properties, 2.27.82.29 |
images by frame, 3.9.2.2 | stack, 5.8.9 |
molecular simulation, 3.9.2 | to chemarray, 2.28.26 |
rotate view, 3.9.1 | user fields, 2.28.47.1 |
zooming, 3.9.1 | assign comment, 2.27.82.14 |
moving selection to another object, 2.28.126.8 | source file, 2.28.48 |
mpeg, 2.27.103.30 | translate, 2.27.96 |
ms_, 2.8.6 | merge, 3.8.6 |
multi center drestraint, 2.20.5 | selecting, 2.8.5 |
multi-part molecule, 2.27.18.2 | obsolete, 2.17.51 |
multiple NMR models, 2.21.14.4 | occlusion shading, 2.27.13 |
alignment, 2.27.3.2 | octanol transfer, 2.28.103 |
to pairwise similarities, 2.29.8 | off, 2.27.77.21 |
conformation storage, 5.8.9 | format, 5.5.3 |
mol as text, 2.28.145.2 | oligonucleotide melting, 2.28.153 |
object file, 2.27.77.2 | on-line help, 2.27.43.1, 2.27.43.2 |
sequence alignment intro, 1.4.3.4 | third, 2.28.34 |
smiles file format, 2.27.77.42 | only, 5.7.2 |
mutate residue, 2.27.62 | openGL window, 2.27.98 |
mutating residue, 3.8.5 | operating system, 2.27.92, 2.28.176, 5.10.2 |
mute, 5.6.15 | optimal chemical superposition, 3.14.5.1 |
mysql, 2.27.16.1 | optimization, 2.27.65 |
nLocalDeformVar, 2.16.15 | Hbond, 2.29.89 |
optimizeHbonds, 2.29.89 | grid type definitions, 2.27.82.64 |
or, 2.12.3 | object, 3.6.1 |
order, 2.27.66.6 | objects, 3.6 |
original sequence names, 2.21.12.14 | pharmacophores, 3.6 |
os_, 2.8.5 | psi plot, 2.29.57 |
other variables, 2.22 | pipe, 2.27.77.40 |
output, 2.16.3 | planar angle, 2.27.59.18 |
overlay by atom pairs, 2.27.90 | plot, 2.27.68 |
chemical substructure, 2.29.22 | 3D 2Dfunction, 3.12.3 |
overview, 1.4 | shape, 3.12.4 |
pK shift, 3.7.3 | area, 2.27.69 |
packing density, 3.3.8 | histogram, 3.12.2 |
pair-distances, 2.27.22.6 | how to, 3.12 |
pairdistance parray, 2.21.5.19 | simple, 3.12.1 |
pairwise interactions, 2.27.82.44 | plot2DSeq, 2.29.50 |
panel layout, 2.21.8.5 | plotBestEnergies, 2.29.53 |
paragraphs, 2.27.103.23 | plotCluster, 2.29.55 |
parallelization, 2.16.4, 2.16.17 | plotFlexibility, 2.29.54 |
parray, 2.27.22.6, 5.7.3 | plotMatrix, 2.29.56 |
parrayTo3D, 2.29.82 | plotRama, 2.29.57 |
parrayToMol, 2.29.81 | plotRose, 2.29.58 |
parse SOAP message, 2.28.174 | plotSeqDotMatrix, 2.29.51 |
parsing, 2.28.79 | plotSeqDotMatrix2, 2.29.52 |
web pages, 2.27.77.43 | plotSeqProperty, 2.29.59 |
partial least squares, 2.27.49 | 3d, 1.4.3.7 |
slide display, 2.27.23.21 | plotting van der Waals, 3.7.1 |
sum, 2.28.68 | faq, 3.7.1 |
passing arguments, 5.8.2 | pls, 2.27.49 |
by reference, 2.27.58 | column contributions, 2.28.149.7 |
pattern, 5.7.4 | model, 2.28.149.7 |
search, 2.27.34.2 | weights, 2.28.149.7 |
pause, 2.27.67 | pmf, 2.20.15 |
pdb, 5.6.10, 5.7.6 | residue profile, 2.29.23 |
file creation time, 2.28.35 | pmf-file, 2.30.19 |
files, 2.30.28 | pmffile, 2.30.19 |
format, 2.27.77.44 | png, 2.27.103.35, 5.7.5 |
merge, 3.4.4 | pocket, 2.29.28, 2.29.87, 3.13.1.1 |
sequence generation, 3.4.3 | point coordinates, 2.28.180.1 |
pdbDirStyle, 2.20.17 | pointer array, 5.7.3 |
peptide, 5.7.7 | polar hydrogens, 2.21.5.27 |
docking, 3.12.5 | surface area, 2.28.103 |
folding, 1.4.2.1 | polarization charge, 3.7.2, 5.7.13 |
intro, 1.4.2.1 | positional constraint, 2.21.14.9 |
personal gui controls, 3.1.2 | postscript, 2.19.23 |
setup, 3.1.2 | potential surface coloring, 5.7.13 |
ph30, 3.12 | pov-ray, 2.27.103.37 |
ph4, 5.7.8 | pow, 2.28.34 |
object faq, 3.6.1 | precision, 2.28.125.2 |
pharmacophore, 2.27.12, 3.5, 5.7.8 | predictSeq, 2.29.60 |
faq, 3.6 | prediction model, 2.28.74 |
score, 2.28.125 | how to, 3.3.3 |
preference, 2.20 | random array, 2.28.110 |
preferences, 3.1.2.3 | order, 2.28.128 |
prepSwiss, 2.29.61 | randomSeed, 2.16.18 |
previous atom, 2.28.90.1 | randomize, 2.16.18, 2.27.76 |
principal axes, 2.28.152 | angles, 2.27.76.1 |
component analysis, 3.3.9 | coordinates, 2.27.76 |
inertia moments, 2.28.78 | torsions, 2.27.76 |
print, 2.27.70 | rarray, 2.27.22.6, 2.28.49.1, 2.28.111.2, 5.7.11 |
bar, 2.27.71 | properties, 2.28.111.4 |
image, 2.27.73 | rdBlastOutput, 2.29.67 |
to string, 2.27.86 | rdSeqTab, 2.29.68 |
printMatrix, 2.29.62 | reaction, 2.27.59.32 |
printPostScript, 2.29.63 | group file, 2.27.50 |
printTorsions, 2.29.64 | read, 2.27.77, 2.27.77.52, 2.27.77.53 |
printf, 2.27.72 | FILTER, 2.27.77.5 |
profile, 5.7.9 | alignment, 2.27.77.11 |
program overview, 1.4 | all, 2.27.77.6 |
progress bar, 2.27.71 | binary, 2.27.77.2 |
progression, 2.27.71 | color, 2.27.77.12 |
project setup, 3.13.2.2 | column, 2.27.77.47 |
projected alignment, 2.28.88.3 | comp_matrix, 2.27.77.13 |
projecting surface charge, 3.7.2 | conf, 2.27.77.14 |
property, 2.27.82.45, 2.27.82.46 | csd, 2.27.77.15 |
grids, 2.17.17 | csv, 2.27.77.41 |
map, 2.27.82.64 | database, 2.27.77.16 |
superposition, 2.27.82.64 | drestraint, 2.27.77.17 |
prosite, 5.7.10 | type, 2.27.77.18 |
pattern, 5.7.4 | entries from database, 2.27.77.7 |
protein docking, 2.28.180.2 | factor, 2.27.77.19 |
intro, 1.4.2.5 | from file, 2.27.77.1 |
grid docking, 3.14.2 | string, 2.27.77.4 |
health, 2.29.57 | fromstring, 2.27.77.4 |
topology, 2.21.5.37 | ftp http, 2.27.77.8 |
psa, 5.7.12 | gamess, 2.27.77.20 |
purple box, 2.28.20 | grob, 2.27.77.21 |
quadratic equation, 2.28.136 | html, 2.27.77.3 |
quantum mechanics, 2.27.77.20, 2.27.103.17 | file, 2.27.77.3 |
qubic equation, 2.28.137 | iarray, 2.27.77.22 |
query, 3.14.6.1 | index, 2.27.77.23 |
molcart, 2.27.74 | table, 2.27.77.7 |
question mark operator, 2.28.145.6 | json, 2.27.77.53 |
quit, 2.27.75 | library, 2.27.77.24 |
property transfer via alignment, 2.28.111.3 | mmff, 2.27.77.25 |
r_2out, 2.17.31 | librarymmff, 2.27.77.25 |
r_out, 2.17.30 | map, 2.27.77.26 |
radii.electrostatic, 2.28.109 | matrix, 2.27.77.27 |
van der Waals, 2.28.109 | mol, 2.18.13, 2.27.77.7, 2.27.77.28 |
rainbow, 2.28.28.1 | mol2, 2.27.77.7, 2.27.77.29 |
ramachandran faq, 3.3.3 | object, 2.27.77.31 |
pdb, 2.21.14.4, 2.27.77.32 | refresh view, 2.27.23.2 |
sequence, 2.27.77.33 | refs, 4.1 |
profile, 2.27.77.34 | regexp, 2.9, 2.28.79 |
prosite, 2.27.77.35 | back references, 2.9.1.3 |
rarray, 2.27.77.36 | syntax, 2.9.1 |
sarray, 2.27.77.37 | regression, 2.27.49 |
sequence, 2.27.77.7, 2.27.77.38 | regul, 2.29.66 |
database, 2.27.77.38.1 | regular expression, 2.9, 2.28.62.3, 2.28.79 |
smiles, 2.27.77.42 | filter, 2.27.77.1 |
stack, 2.27.77.39 | expression, 2.28.115.3 |
string, 2.27.77.40 | regularization, 2.16.7, 2.27.60.4, 5.7.15 |
table, 2.27.77.41 | procedure, 3.8.3 |
csv, 2.27.77.41 | rejectAction, 2.20.18 |
html, 2.27.77.43 | relational database, 2.28.138 |
mmcif, 2.27.77.44 | relative accessible area of atoms, 2.20.1 |
mol, 2.27.77.46 | release notes, 1.1 |
mol2, 2.27.77.45 | remarkObj, 2.29.69 |
trajectory, 2.27.77.30 | remove expression tags, 2.28.168 |
and save a fragment, 2.27.77.30.1 | file, 2.27.22.9 |
write, 2.27.77.30.1 | trailing blanks, 2.28.167 |
unix, 2.27.77.9 | removing html tags, 2.27.77.43 |
cat, 2.27.77.10 | outliers, 2.28.167 |
variable, 2.27.77.48 | rename, 2.27.78 |
view, 2.27.77.49 | chemicals, 2.27.82.40 |
vrestraint, 2.27.77.50 | file, 2.27.78.3 |
type, 2.27.77.51 | molcart, 2.27.78.2 |
with filter, 2.27.77.5 | object, 2.27.78.1 |
xml, 2.27.77.52 | system, 2.27.78.3 |
readMolNames, 2.22.10 | atom, 2.27.78.1 |
readcomp_matrix, 2.27.77.13 | molecule, 2.27.78.1 |
reading external tool output, 2.27.59.1 | residue, 2.27.78.1 |
from standard input, 2.27.77.40 | renaming, 2.21.12.14 |
pdb from ftp, 2.19.18 | reorder, 2.27.66.6 |
web, 2.19.19 | alignment sequences, 2.27.103.1 |
restraint, 2.27.77.50 | array, 2.28.128 |
real, 5.7.14 | objects, 2.27.84.3 |
array, 5.7.11 | replace matching array element, 2.28.115.1 |
shell variables, 2.17 | without interpretation, 2.28.115.2 |
space refinement, 2.27.59.30 | replacing scaffold in a library, 2.27.64.1 |
reals, 2.17 | reproducible randomness, 2.16.18 |
rebel, 2.16.5, 5.7.13 | reroot, 2.27.18.4 |
rebuild molcart index, 2.27.7.9 | selections, 3.3.6 |
recalculate dependent values, 2.27.7.2 | resLabelShift, 2.17.32 |
values, 2.27.1.1.1 | resLabelStyle, 2.20.19 |
receptor, 3.13.1.1 | reserved names, 2.22 |
preparation, 3.13.1.1 | residue, 2.27.13.1, 5.7.16 |
redefine hydrogen coordinates, 2.27.82.22 | accumulators, 2.28.56 |
references, 4 | alignment, 2.27.82.59, 2.27.82.60 |
refineModel, 2.29.65 | conservation, 2.28.111.5 |
reflections, 2.21.5.28 | contact area matrix, 2.28.80.7 |
field, 2.27.82.29 | rounding a real, 2.28.145 |
gap, 2.21.5.6, 2.21.5.7 | output, 2.27.83.43 |
label, 2.27.3.1 | rsWeight, 2.17.33 |
library file, 2.30.20 | rs_, 2.8.7 |
name, 2.28.70 | run script, 2.27.8 |
translation, 2.21.14.11 | running a docking job, 3.13.2.6 |
number, 2.28.59.5 | dock job, 3.13.2.5 |
table, 2.28.149.3 | script from html, 5.8.2 |
property averaging, 2.28.135.3 | s-s bond, 5.4.5 |
calculation, 2.28.56 | s_alignment_rainbow, 2.19.1 |
proximity, 2.28.80.7 | s_blastdbDir, 2.19.2 |
ranges, 2.8.11 | s_editor, 2.19.3 |
selection, 2.18.21 | s_entryDelimiter, 2.19.4 |
as string, 2.28.145.7 | s_errorFormat, 2.19.5 |
function, 2.28.116 | s_fieldDelimiter, 2.19.6 |
table, 3.14.4.1 | s_helpEngine, 2.19.7 |
tethering, 2.27.82.59, 2.27.82.60 | s_icmPrompt, 2.19.10 |
user field, 2.28.47.1 | s_icmhome, 2.19.8, 3.1.2.1 |
residue_selections, 2.8.11 | s_imageViewer, 2.19.11 |
selecting, 2.8.7 | s_inxDir, 2.19.9 |
resizing, 2.28.61 | s_javaCodeBase, 2.19.12 |
restraining molecules to shapes, 2.21.14.9 | s_labelHeader, 2.19.13 |
restraints, 2.15, 2.27.82.59, 2.27.82.60 | s_lib, 2.19.14 |
torsion, 2.27.82.72 | s_logDir, 2.19.15 |
return, 2.27.79 | s_out, 2.19.16 |
reverse complement, 2.28.127.1 | s_pdbDir, 2.19.17 |
lighting, 2.27.82.35 | s_pdbDirFtp, 2.19.18 |
normals, 2.27.82.35 | s_pdbDirWeb, 2.19.19 |
reversing order, 2.28.59.2 | s_printCommand, 2.19.21 |
rgb, 5.7.17 | s_projectDir, 2.19.20 |
matrix, 2.28.28 | s_prositeDat, 2.19.22 |
ribbon, 5.7.18 | s_psViewer, 2.19.23 |
bullets, 2.21.5.6 | s_reslib, 2.19.24 |
diagram, 2.21.5.37 | s_skipMessages, 2.19.25 |
ribbonColorStyle, 2.20.20 | s_sysCp, 2.19.26 |
ribbonStyle, 2.20.21 | s_sysLs, 2.19.27 |
right join, 2.27.48 | s_sysMv, 2.19.28 |
rigid chemical superposition, 2.27.90 | s_sysRm, 2.19.29 |
ring, 2.28.119 | s_tempDir, 2.19.30 |
sampling, 3.13.2.3 | s_translateString, 2.19.31 |
templates, 2.27.82.7 | s_userDir, 2.19.32 |
rocking, 2.27.23.5 | s_usrlib, 2.19.33 |
root mean square deviation, 2.28.125.2 | s_webEntrezLink, 2.19.34 |
roots, 2.28.136, 2.28.137 | s_webViewer, 2.19.35 |
rotate, 2.27.80 | s_xpdbDir, 2.19.36 |
grob, 2.27.80.2 | sa23, 3.3 |
object, 2.27.80.1 | sampling grid, 2.28.180.2 |
view, 2.27.80.3 | sarray, 2.27.22.6, 5.8.1 |
rotation, 2.27.23.5 | transformation in place, 2.27.95.1 |
angle, 2.28.17 | save print, 3.2.6 |
saving graphics to album, 2.27.59.20 | selecting by b-factor, 2.28.126 |
image, 2.27.103.35 | y z, 2.28.126 |
scaffolds, 2.27.50 | columns, 5.9.1 |
scoring, 3.13.1.4 | from clusters, 3.14.6.3 |
screen X, 2.28.178 | neighboring elements, 2.28.90 |
coordinates, 2.28.178 | residues, 3.3.6 |
script, 2.28.88.4, 5.8.2 | saving, 2.28.59.4 |
file name, 2.28.48 | selection, 2.8, 2.28.126, 2.28.126.6 |
inside ICM, 5.8.2 | elements, 2.8.4 |
name, 5.8.2 | examples, 2.8.3 |
image generation, 2.27.23.3 | functions, 2.8.10 |
scripting molecular movements, 3.2.4 | gap patching, 2.28.126, 2.28.126.11 |
sdf, 2.27.103.23 | level, 2.8, 2.28.170 |
file, 2.27.77.45, 2.27.77.46, 2.27.82.40, 2.27.103.11, 2.28.145.2, 5.7.3 | levels, 2.8.2 |
to chem-table, 2.28.98 | simplification, 2.28.126.11 |
search for chemical pattern, 2.28.49.3 | transfer, 2.28.126, 2.28.145.7 |
pdb headers, 3.4.5 | type, 2.8 |
prosite, 3.4.1 | types, 2.8.1 |
sequence pattern, 2.27.34.8 | variable, 2.22.11 |
searchObjSegment, 2.29.72 | atoms, 2.8.8 |
searchPatternDb, 2.29.70 | functions, 2.8.10 |
searchPatternPdb, 2.29.71 | molecules, 2.8.6 |
searchSeqDb, 2.29.73 | objects, 2.8.5 |
searchSeqFullPdb, 2.29.75 | output, 2.22.14 |
searchSeqPdb, 2.29.74 | residues, 2.8.7 |
searchSeqProsite, 2.29.76 | torsions, 2.8.9 |
searchSeqSwiss, 2.29.77 | variables, 2.8.9 |
searches and alignments, 3.4 | selections, 2.27.82.29 |
second moments, 2.28.152 | in molecular objects, 2.8 |
secondary structure derivation from 3D, 2.27.5.1 | selftether, 2.21.14.9, 5.9.4 |
schematic, 2.21.5.37 | seq_ali_project, 2.28.145.5 |
segMinLength, 2.16.19 | sequence, 2.28.161, 2.28.162, 5.8.3 |
segment, 5.8.4 | alignment, 2.28.5.1, 2.29.2 |
select, 2.27.81 | intro, 1.4.3.3 |
atoms by number of bonded atoms, 2.28.126.3 | analysis intro, 1.4.3 |
of the fixed torsions, 2.28.126.2 | assembly, 2.27.41.2 |
by bfactor, 2.28.126.7 | belongs to alignment, 2.28.62 |
center of mass, 2.28.126.14 | conservation, 2.28.125.5 |
coordinates, 2.28.126.7 | distance, 2.28.126 |
iarray, 2.28.126 | matrix from alignment, 2.28.80.8 |
length, 2.28.126.13 | dotplot, 1.4.3.2 |
occupancy, 2.28.126.7 | from pdb, 2.27.59.34 |
user field, 2.28.126.7 | identity, 2.29.8 |
chemical, 2.27.81.1 | intro, 1.4.3 |
lines, 2.27.77.1 | modification, 2.28.168 |
tether partners, 2.28.126.12 | neighbor, 2.28.88.3 |
vw partners, 2.28.126.12 | parray, 5.7.3.2 |
selectMinGrad, 2.17.34 | pattern, 5.7.4 |
selectSphereRadius, 2.17.35 | position correspondence, 2.28.149.3 |
selected stack conformations, 2.27.22.16 | positional weights, 2.27.82.1 |
search, 2.27.34.2 | group, 2.27.82.54 |
selection, 2.27.22.22 | column, 2.27.82.21 |
structure alignment, 2.29.1 | hydrogen, 2.27.82.22 |
to alignment transfer, 2.28.111.3 | key, 2.27.82.36 |
type, 5.8.3 | label, 2.27.82.37 |
sequence-alignment mapping, 2.28.145.4, 2.28.145.5 | 3d label, 2.27.82.37.4 |
sequence-structure alignment, 2.28.5.1 | chemical, 2.27.82.37.3 |
output format, 2.16.20, 2.16.21 | distance, 2.27.82.37.1 |
sequenceBlock, 2.16.20 | table, 2.27.82.37.2 |
sequenceColorScheme, 2.20.22 | map, 2.27.82.38 |
sequenceLine, 2.16.21 | molcart, 2.27.82.39 |
sequences, 3.4 | molecular variables, 2.27.82.74 |
not in alignments, 2.27.22.22 | name, 2.27.82.40 |
set, 2.27.82 | sequence, 2.27.82.40.1 |
alternative atom, 2.27.82.15 | object, 2.27.82.41 |
area, 2.27.82.1 | occupancy, 2.27.82.42 |
atom, 2.27.82.2 | plane, 2.27.82.43 |
background image, 2.27.82.3 | pmf, 2.27.82.44 |
bfactor, 2.27.82.4 | property, 2.27.82.45, 2.27.82.46 |
biological symmetry, 2.27.82.55 | chemical view, 2.27.82.46 |
bond topology, 2.27.82.6 | radii graphical, 2.27.82.77 |
type, 2.27.82.5 | randomSeed, 2.27.82.47 |
and formal charges, 2.27.82.6 | randomize, 2.27.82.47 |
cartesian, 2.27.82.7 | resolution, 2.27.82.48 |
chain, 2.27.82.8 | selftether, 2.27.82.59 |
charge, 2.27.82.9 | site, 2.27.82.23 |
formal, 2.27.82.10 | residue, 2.27.82.25 |
mmff, 2.27.82.11 | slide, 2.27.82.26 |
chargemmff, 2.27.82.11 | sstructure backbone, 2.27.82.50 |
chiral, 2.27.82.12 | sequence, 2.27.82.51 |
color, 2.27.82.13 | to sequence, 2.27.82.51 |
comment, 2.27.82.14, 2.27.82.15 | stack, 2.27.82.52 |
sequence, 2.27.82.16 | energy, 2.27.82.52, 2.27.87.1 |
comp_matrix, 2.27.82.17 | stereo, 2.27.82.49 |
current map, 2.27.82.38 | swiss, 2.27.82.53 |
object, 2.27.82.41 | name, 2.27.82.53 |
directory, 2.27.82.18 | symmetry, 2.27.82.56 |
drestraint, 2.27.82.19 | bio, 2.27.82.55 |
type, 2.27.82.20 | crystal, 2.27.82.54 |
electrostatic radii, 2.27.82.70 | group, 2.27.82.54 |
error, 2.27.82.28 | to a torsion, 2.27.82.56 |
field, 2.27.82.29 | table, 2.27.82.57 |
name, 2.27.82.30 | terms, 2.27.82.58 |
font, 2.27.82.31 | tether, 2.27.82.60 |
grob, 2.27.82.32 | append, 2.27.82.61 |
foreground, 2.27.82.33 | texture, 2.27.82.27 |
format, 2.27.82.34 | type, 2.27.82.62 |
grob, 2.27.82.35 | mmff, 2.27.82.68 |
coordinates, 2.27.82.35 | molecule, 2.27.82.66 |
label, 2.27.82.35 | object, 2.27.82.65 |
sequence, 2.27.82.67 | iarray, 2.27.83.24 |
surface, 2.27.82.63 | integer, 2.27.83.25 |
variable grid, 2.27.82.75 | key, 2.27.83.3 |
variablegrid, 2.27.82.75 | label, 2.27.83.26 |
view, 2.27.82.71 | library, 2.27.83.27 |
vrestraint, 2.27.82.72 | link, 2.27.83.28 |
vrestraintvs_var, 2.27.82.73 | logical, 2.27.83.29 |
radii, 2.27.82.69 | map, 2.27.83.4 |
vwelradii, 2.27.82.70 | mol, 2.27.83.30 |
vwradii, 2.27.82.69 | mol2, 2.27.83.31 |
window, 2.27.82.76 | molecule, 2.27.83.32 |
xstick, 2.27.82.77 | molecules, 2.27.83.5 |
radii, 2.27.82.77 | object, 2.27.83.33 |
setResLabel, 2.29.79 | pdb, 2.27.83.34 |
setcomp_matrix, 2.27.82.17 | pharmacophore type, 2.27.83.51 |
seticmff, 2.29.78 | pmf, 2.27.83.35 |
setting conf properties, 2.27.82.52 | preferences, 2.27.83.36 |
setvs_var, 2.27.82.74 | profile, 2.27.83.37 |
sf-term, 2.27.82.63 | residue, 2.27.83.38 |
sfWeight, 2.17.36 | type, 2.27.83.39 |
sh24, 3.4 | residuetype, 2.27.83.39 |
shadows, 2.21.5.29 | segment, 2.27.83.40 |
shell, 3.1, 5.8.5 | sequence, 2.27.83.41 |
intro, 1.7.1 | shell variable, 2.27.83.2 |
progression, 2.27.71 | site, 2.27.83.1 |
warning message, 2.28.179 | stack, 2.27.83.42 |
shineStyle, 2.20.23 | svariable, 2.27.83.2 |
shininess, 2.17.37 | table, 2.27.83.43 |
show, 2.27.83, 2.27.83.37 | as database, 2.27.83.16 |
alias, 2.27.83.6 | term, 2.27.83.44 |
aliases, 2.27.83.6 | tethers, 2.27.83.45 |
alignment, 2.27.83.7 | version, 2.27.83.46 |
area, 2.27.83.8 | volume, 2.27.83.49 |
atom, 2.27.83.9 | map, 2.27.83.50 |
type, 2.27.83.10 | volumemap, 2.27.83.50 |
atoms, 2.27.83.9 | vrestraint, 2.27.83.47 |
bond, 2.27.83.11 | type, 2.27.83.48 |
clash, 2.27.83.12 | vrestraints, 2.27.83.47 |
color, 2.27.83.13 | showcomp_matrix, 2.27.83.15 |
column, 2.27.83.14 | showing weak hydrogen bonds, 2.21.5.20 |
comp_matrix, 2.27.83.15 | side chain, 2.29.88 |
database, 2.27.83.16 | flexibility, 2.29.88 |
drestraint, 2.27.83.17 | sigma level, 2.21.7.5 |
type, 2.27.83.18 | signal recognition measure, 2.29.21 |
energy, 2.27.83.19 | similar chains, 2.28.126.13 |
gradient, 2.27.83.20 | similarity, 2.27.34.9, 2.27.34.10 |
hbond, 2.27.83.21 | simple expressions, 2.9.1.1 |
exact, 2.27.83.22 | string substitution, 2.28.115.2 |
hbondexact, 2.27.83.22 | simplify mesh structure, 2.27.15.1 |
html, 2.27.83.23 | simulation duration, 2.17.44 |
intro, 1.4.2 | to molecules, 2.27.85.6 |
site, 2.27.11.2, 5.8.6 | sequence, 2.27.85.4 |
arrows, 2.27.82.23 | table, 2.27.85.3 |
table, 2.28.149.8 | cell, 2.27.85.5 |
by residue selection, 2.27.22.23 | to columns, 2.27.85.3 |
sequences, 2.28.149.8 | tree, 2.27.85.7 |
sixthe power, 2.20.5 | splitting selection, 2.8.11 |
skin, 5.8.7 | sprintf, 2.27.86 |
intro, 1.4.1.2 | sql, 2.27.74, 2.27.82.39, 2.28.43.1, 2.28.88.10, 2.28.91.5, 2.28.170.2 |
slide, 2.27.1.3, 2.28.133, 5.8.14 | sqlite, 3.5.1 |
transition time, 2.27.23.21 | sqrt, 2.28.34 |
slides, 2.28.178 | square matrix to element pairs, 2.28.149.5 |
slideshow, 2.27.1.3, 2.27.23.21, 2.28.133 | ssThreshold, 2.17.38 |
sln, 5.8.8 | ssWeight, 2.17.39 |
smallest set of smallest rings, 2.28.119 | ssbond, 5.4.5 |
smarts, 2.28.62.1 | ssearch, 2.16.16, 2.27.88 |
smiles, 2.24 | ssearchStep, 2.17.40 |
to chem-table element, 2.28.98 | ssign sstructure segment, 2.27.5.2 |
smooth alignment, 2.28.135.4 | stack, 2.16.11, 2.16.12, 2.16.14, 2.20.6, 2.27.82.52, 2.27.87, 2.27.87.1, 2.28.59.6, 2.28.149.6, 5.3.12, 5.8.9 |
interpolation, 2.27.87.3 | bin size, 2.27.14 |
map, 2.28.135.5 | cleaning, 2.27.22.16 |
rarray, 2.28.135.1 | extension, 2.27.4.2 |
surface, 2.29.86 | multiplication, 2.27.4.2 |
soap, 2.25 | merge, 3.7.7 |
soft trim, 2.28.167 | standard chemical form, 2.27.64.4 |
solid sphere, 2.21.5.8 | deviation, 2.28.122 |
solubility, 2.28.103 | standardization, 2.27.22.11 |
solvation, 2.20.24, 2.21.14.2 | chemical, 2.27.64 |
energy, 2.17.36, 2.20.24 | startup, 3.1.2.3 |
solvent accessible area, 2.16.22 | static RMSD, 2.28.144 |
surface, 2.21.5.49, 2.21.5.50, 2.27.83.8 | and dynamic hbonds, 2.21.5.19 |
sort, 2.27.84, 2.27.84.3 | stereo, 2.21.5.46, 2.27.29, 2.27.82.49 |
array, 2.27.84.1 | reconstruction, 3.8.9 |
arrays, 2.27.84.1 | stereo-specific hydrogens, 2.27.22.11 |
molecules, 2.27.84.4 | stereoisomer, 2.27.29 |
object, 2.27.84.3 | stereoisomers, 2.18.16 |
stack, 2.27.84.5 | stick, 5.8.10 |
table, 2.27.84.2 | store, 2.27.87 |
sortSeqByLength, 2.29.80 | conf, 2.27.87, 2.27.87.1 |
space group, 2.27.63 | frame, 2.27.87.3 |
transformations, 2.28.165 | image, 2.27.59.20 |
sparse atoms, 2.21.14.3 | stack object, 2.27.87.2 |
spawn background job, 2.27.59.1 | torsion type, 2.27.87 |
special values, 2.28.157 | strength of hydrogen bond, 2.27.23.14 |
specificity, 2.28.125.2 | string, 5.8.11 |
split, 2.27.85 | array, 2.28.124, 5.8.1 |
column values, 2.27.85.5 | filtering, 2.28.167 |
grob, 2.27.85.1 | inversion, 2.28.145.1 |
group, 2.27.85.2 | label, 2.27.23.12 |
object, 2.27.85.6 | matching, 2.9, 2.28.79 |
strings, 2.19 | command, 2.27.92 |
strip, 2.27.89 | copy, 2.19.26 |
struct, 2.28.88.2 | file move, 2.19.28 |
structural alignment, 2.27.3.4, 2.28.5.2 | list file, 2.19.27 |
optimization, 2.27.34.1 | remove, 2.19.29 |
superposition, 2.27.3.4 | table, 2.27.22.4, 2.27.82.45, 2.27.82.46, 5.9.1 |
analysis, 3.3 | actions, 5.9.2.4 |
comparison, 2.28.22.2 | column, 2.28.88 |
factors, 3.11.1 | format, 2.27.82.34 |
structure, 3.11.1 | plot, 2.27.59.31 |
sub-alignment to selection, 2.28.117 | transformations, 2.28.93 |
sub-matrix, 2.28.80.2 | creation, 2.27.41.3 |
subalignment, 2.28.5.3 | display style, 5.9.1 |
submap, 2.28.76 | expression, 5.9.2 |
subroutine, 2.27.58 | from matrix, 2.28.149.4 |
subset, 2.6 | grid view, 5.9.1 |
substring, 2.28.79, 2.28.145, 2.28.145.1 | of atoms and distances, 2.28.149.9 |
substructure, 2.27.34.9, 2.27.34.10 | operations, 5.9.2.1 |
search, 2.27.34.4 | plot, 5.9.2.3 |
superimpose, 2.21.14, 2.27.90 | principal component analysis, 2.27.59.28 |
faq, 3.3.1 | print, 2.27.83.43 |
how to, 3.3.1 | row, 2.27.66.4 |
minimize, 2.27.91 | label mark, 2.27.82.37.2 |
support, 1.3 | mark, 2.28.70 |
suppressing view changes, 2.27.23.21 | selected row numbers, 2.28.62 |
surface, 5.8.15 | subset, 5.9.2.2 |
accessibility, 2.27.83.8 | show html, 2.27.101.1 |
area, 2.29.3, 5.8.15 | targa, 5.9.3 |
charge, 5.7.13 | target coordinates, 5.9.4 |
color, 2.27.82.13 | tautomer, 2.27.30 |
dot density, 2.21.5.49 | tempCycle, 2.17.43 |
energy, 2.20.24, 2.27.82.63 | tempLocal, 2.17.42 |
mesh, 2.28.180.2 | temperature, 2.17.43 |
point selection, 2.28.180 | variations in optimizer, 2.17.43 |
term, 2.17.36 | template docking, 3.13.2.7 |
surfaceAccuracy, 2.16.22 | tensor product of two vectors, 2.28.80 |
surfaceMethod, 2.20.24 | terminal font, 2.30.14 |
surfaceTension, 2.17.41 | window, 2.27.42 |
svariable, 5.8.12 | terms, 2.15 |
swapping protein fragments, 3.8.7 | hydrogen bonding, 2.17.18 |
swiss, 2.27.82.53 | test, 2.27.93 |
swissFields, 2.22.9 | binary, 2.27.93.1 |
swissprot, 2.27.82.23 | testing if argument exists, 2.28.52 |
symmetrization of a matrix, 2.28.80.3 | tether, 2.21.14.9, 2.27.103.9, 5.9.4, 5.9.5 |
symmetry, 2.28.165 | text, 2.28.79 |
faq, 3.10 | search in tables, 2.28.49.2 |
group, 2.16.2 | to script, 5.8.2 |
problem, 2.27.63 | texture, 5.5.3 |
sys, 2.27.92 | tga, 5.9.3 |
system, 5.10.2 | then, 2.27.94 |
threading, 2.28.5.1 | undisplay, 2.27.97 |
letter code, 2.28.161, 2.28.162 | graphics, 2.27.98 |
thumbnails, 2.28.61 | window, 2.27.98 |
tif, 5.9.6 | unfix, 2.27.99 |
time, 2.28.35 | unique, 2.27.13.1, 5.10.1 |
timeLimit, 2.17.44 | atomic order, 2.27.59.36 |
tolFunc, 2.17.46 | column values, 2.27.41.4 |
tolGrad, 2.17.45 | names, 2.28.88 |
topological psa, 5.7.12 | new object name, 2.28.88 |
torsion rmsd comparison, 2.27.14.2 | smiles, 2.27.59.36 |
torsions, 2.28.91.3 | unix, 2.27.92, 5.10.2 |
tpsa, 5.7.12 | grep, 2.27.77.1 |
trajectory, 2.27.57.2, 2.27.87, 2.27.87.3, 5.6.14 | unlink alignments, 2.27.22.20 |
file, 2.30.17 | sequences, 2.27.22.20 |
frame writing, 2.27.23.17 | variables, 2.27.22.20 |
smoothing, 2.27.23.17 | update database, 2.27.64.5 |
transform, 2.27.95, 2.27.95.2 | speadsheet, 2.27.1.1.1 |
general, 2.27.95 | updates, 1.1 |
grob coordinates, 2.27.95.2 | updating atom pairs, 2.18.27 |
molecules, 2.27.95.2 | url string parsing, 2.28.149 |
sarray, 2.27.95.1 | user atom display, 2.21.5.2 |
transformation, 5.9.7 | environment, 3.1.2.2 |
vector, 5.9.7 | menu, 2.21.10.1 |
and symmetry, 3.10 | user-defined properties, 2.27.82.29 |
transforming points, 2.28.180.4 | solvation parameters, 2.28.7 |
translate, 2.27.96 | user_startup, 3.1.2.4 |
transparency, 2.27.82.35, 5.5.3 | icm, 3.1.2 |
background, 2.27.103.35 | guide, 3 |
grob, 2.27.23.11 | v_, 2.8.1 |
grobs, 2.21.5.51 | van der Waals surface, 2.21.5.50 |
tree, 2.27.59.35, 2.28.88.5 | varLabelStyle, 2.20.26 |
cluster, 2.11 | variable restraint, 2.27.82.72 |
delete, 2.27.22.34 | selection, 2.8.9 |
label format, 2.28.88.5 | vector, 2.28.91.6 |
representatives, 2.11.1 | dot product, 2.28.175.1 |
trim string array, 2.27.95.1 | length, 2.28.92 |
trimming grid map values, 2.28.167 | product, 2.28.175.1 |
true positives, 2.28.125.2 | transformation, 2.28.93 |
truncate alignment, 2.27.59.33 | vertex, 2.27.13.4.2 |
values, 2.28.167 | connectivity, 2.28.80.12 |
tsv table format, 2.27.77.41 | vertexes, 2.27.13.4.2 |
two alignments, 2.28.38.11 | vertical alignment block, 2.27.59.33 |
dimensional plot, 2.28.135.2 | workspace, 2.21.8.5 |
txdoc browser, 2.27.77.3 | vertices, 2.27.13.4.2 |
type, 2.28.170.1 | vicinity, 2.17.48 |
tzMethod, 2.20.25 | video, 2.27.103.30 |
tzWeight, 2.17.47 | view point, 2.28.178 |
uncharge functional groups, 2.27.64.2 | restoration, 2.28.65 |
unclip, 2.27.23.2 | transition, 2.27.82.71 |
underline, 2.27.82.31.1 | views, 5.8.14 |
arrays, 2.27.1.1.1 | workspace, 2.27.98 |
chemistry, 2.27.64, 2.28.91.4 | write, 2.27.103 |
field, 2.27.7.2 | album, 2.27.103.21 |
ligand screening, 3.13, 3.13.1, 3.13.2, 3.13.3 | alignment, 2.27.103.1 |
intro, 1.4.2.7 | array, 2.27.103.8 |
visitsAction, 2.20.27 | table, 2.27.103.8 |
vls, 3.13, 3.13.1, 3.13.2, 3.13.3 | binary, 2.27.103.2 |
cluster, 3.13.3.6 | blast, 2.27.103.24 |
faq, 3.13.3 | column, 2.27.103.12 |
intro, 1.4.2.7 | database, 2.27.103.13 |
job queueing, 3.13.3.6 | drestraint, 2.27.103.14 |
overview, 3.13.1 | type, 2.27.103.15 |
parallelization, 3.13.3.5 | factor, 2.27.103.16 |
results, 3.13.3.8 | gamess, 2.27.103.17 |
scores storage, 3.13.3.7 | grob, 2.27.103.18 |
threshold, 3.13.3.2 | html, 2.27.103.19 |
vls_intro, 3.13.3.1 | iarray, 2.27.103.3 |
volume, 5.10.4 | image, 2.27.103.20 |
vrestraint, 5.10.5 | chemical, 2.27.103.22 |
file, 2.30.23 | parray, 2.27.103.21 |
type, 5.10.6 | index, 2.27.103.23 |
file, 2.30.22 | blast, 2.27.103.24 |
vs_, 2.8.9 | library, 2.27.103.25 |
vs_out, 2.22.14 | map, 2.27.103.26 |
vwCutoff, 2.17.49 | matrix, 2.27.103.6 |
vwExpand, 2.17.50 | model, 2.27.103.27 |
vwExpandDisplay, 2.17.51 | mol, 2.27.103.28 |
vwMethod, 2.20.28 | mol2, 2.27.103.29 |
vwSoftMaxEnergy, 2.17.52 | molcart, 2.27.103.7 |
wait, 2.27.100 | movie, 2.27.103.30 |
warning, 2.21.14.3 | object, 2.27.103.31 |
message, 2.28.179 | parray, 2.27.103.33 |
suppression, 2.18.28 | simple, 2.27.103.32 |
water.dielectric constant, 2.17.12 | pdb, 2.21.14.11, 2.27.103.34 |
waterRadius, 2.17.53 | png, 2.27.103.35 |
wavefront format, 2.27.59.11 | postscript, 2.27.103.36 |
web, 2.27.101 | pov, 2.27.103.37 |
table, 2.27.101.1 | povray, 2.27.103.37 |
webEntrezOption, 2.20.29 | project, 2.27.103.2 |
weighted rmsd, 2.21.14 | rarray, 2.27.103.4 |
while, 2.27.102 | sarray, 2.27.103.5 |
whole string, 2.28.115.1 | sequence, 2.27.103.38 |
window averaging, 2.28.135.1 | session, 2.27.103.39 |
layout, 2.28.145.8 | several array, 2.27.103.8 |
width and height, 2.28.178 | simple object, 2.27.103.32 |
windowSize, 2.16.23 | stack, 2.27.103.40 |
movie, 2.27.103.30 | table, 2.27.103.10 |
wire, 5.10.7 | mol, 2.27.103.11 |
wireBondSeparation, 2.17.54 | with links, 2.27.103.19 |
wireStyle, 2.20.30 | tether, 2.27.103.9 |