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17.5 Set Formal Charges
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To set formal charge:
Read in a chemical spreadsheet
File/Open SDF
Chemistry/Set
Formal Charges
Enter the name of the chemical spreadsheet (table)
Choose the option to either make
Charge
,
Make
Neutral, or Charge according to ICM pKa Model
Select the groups you want to charge or neutralize.
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Align/Color by 2D Scaffold
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