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MODA Training and Validation Set
| Protein_Name | Domain | PDB | Membrane_Inserting_Residues | Reference |
| PKCa | C2 | 1dsyA | 188:190;247;249:253 | (Kohout et al., 2003; Verdaguer et al., 1999) |
| Cytosolic phospholipase A2 | C2 | 1cjyA | 33:36; 38:39; 62:65; 95:98 | (Dessen et al., 1999; Frazier et al., 2002; Xu et al., 1998) |
| Synaptotagmin-1 | C2 | 1rsyA | 173:177; 232:238 | (Chae et al., 1998; Frazier et al., 2003; Sutton et al., 1995) |
| Synaptotagmin-1 | C2 | 1tjxA | 305:307; 367:369 | (Cheng et al., 2004; Rufener et al., 2005) |
| Sec14 | Sec14 | 1auaA | 218:221; 223:224; 227:228; 230:231 | (Sha and Luo, 1999; Sha et al., 1998) |
| Epsin-1 | ENTH | 1h0aA | 1:7; 9:16 | (Ford et al., 2002) |
| Coagulation factor V | C | 1czsA | 2090:2093; 2142:2147 | (Macedo-Ribeiro et al., 1999) |
| Coagulation factor VIII | C | 1d7pM | 2217:2220; 2268:2272 | (Pratt et al., 1999) |
| EEA1 | FYVE | 1jocA,B | 1352:1353; 1365:1371 | (Dumas et al., 2001; Kutateladze et al., 2004; Kutateladze and Overduin, 2000) |
| HRS | FYVE | 1dvpA | 171:175 | (Mao et al., 2000; Stahelin et al., 2002) |
| VPS27 | FYVE | 1vfyA | 181:189 | (Misra and Hurley, 1999; Stahelin et al., 2002) |
| Thrombin | Gla | 1nl2A | 44:53; 59 | (Falls et al., 2001; Huang et al., 2003) |
| p47-phox | PX | 1o7kA | 64:69; 77:85 | (Karathanassis et al., 2002; Stahelin et al., 2003) |
| p40-phox | PX | 1h6hA | 35:36; 58; 60; 92:98 | (Bravo et al., 2001; Stahelin et al., 2003) |
| Sgk3 | PX | 1xteA | 76:82 | (Xing et al., 2004) |
| SNX3 | PX | 1ocuA | 112:118 | (Zhou et al., 2003) |
| PKC-d | Cys2 | 1ptrA | 239:243; 250; 252:254 | (Wang et al., 2001; Xu et al., 1997; Zhang et al., 1994) |
| Cytochrome P450 | P450 | 1dt6A | 30:31; 33:34; 36:41; 43:45; 60:63; 68:69; 376:377; 379 | (Headlam et al., 2003; Williams et al., 2000) |
| PI-PLC | PI-PLC | 1gymA | 73:75; 77:78; 268:274 | (Feng et al., 2002; Heinz et al., 1996) |
| Ganglioside GM2 activator protein | GM2-AP | 1tjjA | 90:95; 160:163 | (Wright et al., 2003) |
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