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Contents
 
Introduction
Help Videos
Reference Guide
Getting Started
Protein Structure
Molecular Graphics
Slides & ActiveICM
Sequences & Alignments
 Read and Save
 Secondary Structure
 Bioinfo Menu
 BLAST Search
 Sequence Editor
 Alignments
 Editor
 Color Structure by Alignment
Protein Modeling
Cheminformatics
Learn and Predict
Docking
Virtual Screening
Molecular Dynamics
Run MD
MolScreen
3D Ligand Editor
Tables and Plots
Local Databases
ICM-Scarab
KNIME
Tutorials
FAQs
 
Index
PrevICM User's Guide
8.2 Sequence Secondary Structure		Next

If a sequence has assigned secondary structure then colored lines will appear under the sequence in the ICM Workspace. Regions underlined in red = alpha helix, green = beta sheet, blue = pi helix, magenta = 3/10 helix.

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