ICM User's Guide: How to Save Ligand Receptor Complex as PDB

Feb 13 2026 Feedback.

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Contents


Introduction
Help Videos
Reference Guide
Getting Started
Protein Structure
Molecular Graphics
Slides & ActiveICM
Sequences & Alignments
Protein Modeling
Cheminformatics
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Docking
Virtual Screening
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3D Ligand Editor
Setup Ligand and Receptor
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Dock Table
Fragment Linking - Core Replacement
Restraints
Flexible Groups
Refinement
Multiple Receptor Docking
Covalent Docking
Dock to APF
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Save Docked Complex
Peptide Modeling
Export Docking Project
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Tables and Plots
Local Databases
ICM-Scarab
KNIME
Tutorials
FAQs

Index

ICM User's Guide
16.19 How to Save Ligand Receptor Complex as PDB

Available in the following product(s): ICM-Pro | ICM-VLS | ICM-Chemist-Pro

To save a docked ligand as a PDB file in complex with the receptor in the ICM 3D Ligand Editor:

Advanced/Export Complex

Please note this option is for the 3D Ligand Editor (ligedit tab). If you want to save a PDB file outside of the editor see the instructions here.

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