[ Download | Graphical Display | Selections | Convert, Hydrogens and Pockets | Effects | Labels and Annotations | Images | Superimpose | Distances and Angles ]

Available in the following product(s): ICM-Browser | ICM-Browser-Pro | ICM-Chemist | ICM-Pro

For instructions on how to use ICM-Browser to make fully-interactive 3D slides and publish them in PowerPoint and the web please see the ActiveICM User Guide. ActiveICM is a free plugin for Windows PowerPoint and web browsers. Other related tutorials include: Graphical Display: Molecule Representation, Coloring, Labeling and Annotation Graphical Selections Tutorial Creating Fully Interactive Slides for PowerPoint and the Web Tutorial

3.1.1 Download and Install ICM-Browser

Getting Started: Download and Install ICM-Browser and ActiveICM.
Download ICM-Browser Distribution.	Download	video
Install ICM-Browser Instructions.	Windows Linux Mac
Download ActiveICM Distribution.	Download	video
Install ActiveICM.	Windows Linux Mac

3.1.2 How to use the Graphical Display

How to use the Graphical Display
How to search the PDB.	HTML GUI Manual	video
How to Move a Structure in the Graphical Display.	HTML GUI Manual	video
How to use the Graphics window controls.	HTML GUI Manual
How to use the ICM Workspace Panel	HTML GUI Manual	video
How to Display a Molecule.	HTML GUI Manual	video
How to Change Protein Representation.	HTML GUI Manual	video
How to Change Ribbon Representation.	HTML GUI Manual	video
How to color wire or xstick carbon atoms.	HTML GUI Manual	video
How to Display the Residues Surrounding the Ligand Binding Pocket.	HTML GUI Manual	video
How to remove chain breaks (dotted lines).	HTML GUI Manual	video
How to Color.	HTML GUI Manual	video
How to Change the Color of Molecule Representations.	HTML GUI Manual	video
How to Change the Background Color.	HTML GUI Manual	video
How to Display a Binding Pocket Surface	HTML GUI Manual	video
How to (Un)Display Hydrogens.	HTML GUI Manual	video
How to Save an ICM Object.	HTML GUI Manual	video
How to Save an ICM Project File.	HTML GUI Manual	video
How to Drag and Drop.	HTML GUI Manual
How to: Right Click Options.	HTML GUI Manual
How to Move Windows.	HTML GUI Manual	video
How to Arrange Windows	HTML GUI Manual	video

3.1.3 How to make Graphical Selections

How to Make Selections.	HTML GUI Manual
How to Select an Object	HTML GUI Manual	video
How to Select a Molecule	HTML GUI Manual	video
How to Select Residues	HTML GUI Manual	video
How to Select Atoms	HTML GUI Manual	video
How to Make a Spherical Selection.	HTML GUI Manual	video
How to Invert a Selection.	HTML GUI Manual	video
How to Remove a Selection.	HTML GUI Manual	video
How to Change the Selection Level and Mode.	HTML GUI Manual	video
How to Check What is Selected.	HTML GUI Manual

3.1.4 How to Convert Proteins, Display Hydrogens and Ligand Binding Pocket.

Convert Protein, Display Hydrogens and Ligand Binding Pocket.
How to Convert a PDB Structure into an ICM Object.	HTML GUI Manual	video
How to Display Ligand Binding Pocket.	HTML GUI Manual	video
How to Display Hydrogen Bonds.	HTML GUI Manual	video

3.1.5 How to change Graphics Effects

How to change Graphics Effects
How to display the FOG effect.	HTML GUI Manual	video
How to display side-by-side stereo.	HTML GUI Manual
How to display Anaglyph stereo.	HTML GUI Manual
How to toggle full screen mode.	HTML GUI Manual	video
How to adjust perspective.	HTML GUI Manual
How to change the lighting.	HTML GUI Manual	video
How to display sketch accents.	HTML GUI Manual	video
How to display elegant ribbon and ligand sketch.	HTML GUI Manual	video

3.1.6 How to add Labels and Annotations

How to add Labels and Annotations
How to Label Residues.	HTML GUI Manual	video
How to Label Atoms.	HTML GUI Manual	video
How to Label Variables.	HTML GUI Manual	video
How to Display and Undisplay Sites.	HTML GUI Manual
How to Make and Display Sites (Annotations).	HTML GUI Manual
How to Make and Display 2D and 3D Labels.	HTML GUI Manual	video

3.1.7 How to Make High Quality Publication Images

How to Make High Quality Publication Images
How to Toggle High Quality Display	HTML GUI Manual	video
How to Toggle Antialiasing.	HTML GUI Manual	video
How to Copy Image to ClipBoard	HTML GUI Manual	video
How to Write an Image.	HTML GUI Manual	video
How to Use the Advanced Write Image Options.	HTML GUI Manual	video
How to Add an Image to the ICM Photo Album.	HTML GUI Manual	video

3.1.8 How to Superimpose Protein Structures.

How to Superimpose Protein Structures.
How to Superimpose Two or More Protein Structures.	HTML GUI Manual	video

3.1.9 How to Measure Distances and Angles.

How to Measure Distances and Angles.
How to Measure Distances Between Two Atoms.	HTML GUI Manual	video
How to Measure Distances From One Atom to Many.	HTML GUI Manual	video
How to Show Corresponding Distances in Two Objects.	HTML GUI Manual	video
How to Display the Ruler Bar.	HTML GUI Manual	video