This option allows you to search the currently loaded PDB files or ICM objects and identify chains which are similar and/or related.

You can do this by:

• Select the objects or pdb files you want to compare.
• Tools/Analysis/Find Related Chains
• Click OK to confirm the selection you made
• A table as shown below will be displayed.

name1 = Name of query structure molecule name2 = Name of hit len1 = length of query len2 = length of hit seqid = Sequence identity percentage consensus = Consensus sequence